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SCNpilot_expt_1000_bf_scaffold_448_curated_26

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 29034..31706

Top 3 Functional Annotations

Value Algorithm Source
ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 891.0
  • Bit_score: 1339
  • Evalue 0.0
DNA ligase D n=1 Tax=Afipia felis ATCC 53690 RepID=K8NE96_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 886.0
  • Bit_score: 1371
  • Evalue 0.0
DNA ligase D {ECO:0000313|EMBL:EKS28947.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 886.0
  • Bit_score: 1371
  • Evalue 0.0

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2673
GTGGCCGATCAGCTTTCGCTTTACCGCACCAAGCGCGATTTCAACAAAACCTCCGAACCGAGCGGCACGGCGAAAATCGCGCCCGCTAAACAGCGCCGTTTTGTCATCCAAAAGCACGACGCCACGCGCCTGCATTACGATCTGCGGCTGGAGCTCGACGGTGTTTTTAAATCATGGGCGGTGACCCGCGGCCCCTCGCTCGATCCGAAAGACAAGCGCCTCGCCGTCGAGGTCGAAGACCATCCGCTCGACTATGGCGACTTCGAAGGCACGATTCCAAAAGGCCAGTATGGCGGCGGCACCGTGCAATTGTGGGATCGCGGCACCTGGAGCTGCGACGATCCCGAGCGCGGCTTCAAGAAGGGCGATCTCAAATTCACGCTCGACGGCGAGAAGCTGCATGGCGGCTGGGTGCTGGTGCGGATGCGTCACGACCGCAGCGGCGGCAAACGCACCAACTGGCTGCTGATCAAGCATCGCGACGAATACGCTAGGGAAGGCAGCGACAACGACATTCTCGACCTGGACAGATCGGTCGCCTCGGGCCGCTCGATGGATCAGATCGCGCAGGGCAAGGGCCGCGGCCCCAAGCCGTTCATGATCCGCGCCGCTGCGCGCGCCAGAGCGGACAACGTCTGGAATTCGGATCAGGGACTGGCGGCGGAGGCGCGCGGCACAACCGGCAAGCCGAAAACCAAGGCGGCCACGACGCCGCGCGACGCCGCCAACGCCCGCACGCGAACGGCCAGGAAGTTGCCGGACTTCATCGCACCGCAATTGTGCAAGTCGGTGGCGCGGCCGCCCGCTGGCGCGGACTGGGTGCACGAGATCAAGTTCGACGGCTATCGCATGCAGATGCGGATCGAGAATGGCAAAGCCGTTCTGCGCACGCGCAAAGGCCTCGACTGGACCGACAAGTTCGCGGCGATCGCCAAAGCCGGCAGCAAACTGCCGGATGCCATTATCGACGGCGAGATCGTGGCGCTGGATCACAACGGCTCGCCGAGCTTCGCGGCATTGCAAGCCGCGCTGTCGGACGGCAAGACCGATCATCTGGTCTTCTTCGTCTTCGATCTTCTGTTCGCCGGACACGAGGATCTGCGCCGCCTGCCGCTTCTTGAACGCAAGGAACGGCTGAAAGCGCTGCTGGACGGCAGGAACGGCAAAGGCGTGATCCGCTATGTCGAGCATTTCGAAACCGGCGGCGACGCGGTGCTGAAATCCGCCTGCCAATTGTCGCTCGAAGGCATCATCTCCAAGAAGCGCGACGCGCCCTACCGTTCCGGGCGCGTCGACGCCTGGACCAAGGCGAAGTGCCGCGCCGGCCATGAGGTCGTGATCGGCGGCTGGAAAACCACCGCCGGCAAGTTCCGCTCGCTGATGGCCGGCGTGCCGCGCAACGGACATCTGGCTTATGTCGGCATCGTCGGCACCGGCTATGGCCAGGCCGTGGTGAAGCAGATCATGCCGGCGCTGAAAGCCGCGGCCGCGAAGCAGAATCCGTTCGGCGGCAAAAACGCGCCTAAGAAAACCACCGGCGTGCATTGGTTAAAGCCCGAGCTGGTCGCCGAGATCGAATTCGCCGGATGGACCGGCGACAGCATGGTGCGGCAGGCGTCGTTCAAGGGTCTGCGCAAAGACAAGACGCCGGACGAGGTCGTCGTTGACGAGCCGAGCAACGCGCCGGTGGCGGAGCCCGCCTCACGCGGCAAGGCGGCGAAAGGAATCGCGAAGCGAACCACGCGCGCGCGCGCGAGCCGCACATCGGGCAACGGCGCAGCGGTGATGGGCGTGGTCATCTCCAAGCCCGACAAGGCGCTGTGGCCAGATGGCGGCGACGGCGAACCCGTTACCAAGCTCGACCTCGCGCATTACTTCGAGAGCGTCGGCGAATGGATGATCGATCACATCAAGGGTCGGCCCTGCTCGATCGTGCGCGCGCCCGATGGCATTCACGGCGAGACCTTCTTCCAGCGCCACGTCAGCGCCGGAATGTCGAACCTGTTCGAACAGGTCACGGTCTCGGGCGACCGCAAGCCCTATGTACAGATCGACCGGATCGAGGGCCTGATCGCGGCGGCGCAGATCGGCGGCCTCGAACTGCACCCATGGAATTGCGCGCAAGACGAACCCGAGGTTCCCGGCCGCTTCGTGTTCGATCTCGATCCCGCTCCCGACGTGGACTTCGACGCAGTAGTCGATACCGCGCGCGAGATGCGTGAACGGCTCGCCGCCGTGGGGCTGGAAAGCTTCTGCAAGACCACCGGCGGCAAGGGCATTCATGTCGTCGCGCCGCTCAAGGACGCAAAGAAGGATCGCATCGACTGGAAACGCGCGAAAGCTTTCGCGCAGGCGATCTGCCAGCAGATGGCGGTCGACAACCCGGAGCGCTATCTGCTCAACATGTCGAAGAAGCAGCGCAAGGGCAAAATTTTCCTCGACTACCTGCGCAACGACCGGATGTCGACGGCGGTGGCGCCGCTCTCGCCCCGCGCGCGCGAAGGCGCGACGGTGTCGATGCCGCTCACATGGGCGCAGGTGCGCCGCGGGCTCGATCCGAAGACCTACACGATACGAACGGCGCCGGCGCTGCTCAGAAAATCGAAAGCGTGGGCGGACTATGATCGCGCGGCGCGTTCGCTGAAAGCGGCGATGGCAAAACTCAAAATGTGA
PROTEIN sequence
Length: 891
VADQLSLYRTKRDFNKTSEPSGTAKIAPAKQRRFVIQKHDATRLHYDLRLELDGVFKSWAVTRGPSLDPKDKRLAVEVEDHPLDYGDFEGTIPKGQYGGGTVQLWDRGTWSCDDPERGFKKGDLKFTLDGEKLHGGWVLVRMRHDRSGGKRTNWLLIKHRDEYAREGSDNDILDLDRSVASGRSMDQIAQGKGRGPKPFMIRAAARARADNVWNSDQGLAAEARGTTGKPKTKAATTPRDAANARTRTARKLPDFIAPQLCKSVARPPAGADWVHEIKFDGYRMQMRIENGKAVLRTRKGLDWTDKFAAIAKAGSKLPDAIIDGEIVALDHNGSPSFAALQAALSDGKTDHLVFFVFDLLFAGHEDLRRLPLLERKERLKALLDGRNGKGVIRYVEHFETGGDAVLKSACQLSLEGIISKKRDAPYRSGRVDAWTKAKCRAGHEVVIGGWKTTAGKFRSLMAGVPRNGHLAYVGIVGTGYGQAVVKQIMPALKAAAAKQNPFGGKNAPKKTTGVHWLKPELVAEIEFAGWTGDSMVRQASFKGLRKDKTPDEVVVDEPSNAPVAEPASRGKAAKGIAKRTTRARASRTSGNGAAVMGVVISKPDKALWPDGGDGEPVTKLDLAHYFESVGEWMIDHIKGRPCSIVRAPDGIHGETFFQRHVSAGMSNLFEQVTVSGDRKPYVQIDRIEGLIAAAQIGGLELHPWNCAQDEPEVPGRFVFDLDPAPDVDFDAVVDTAREMRERLAAVGLESFCKTTGGKGIHVVAPLKDAKKDRIDWKRAKAFAQAICQQMAVDNPERYLLNMSKKQRKGKIFLDYLRNDRMSTAVAPLSPRAREGATVSMPLTWAQVRRGLDPKTYTIRTAPALLRKSKAWADYDRAARSLKAAMAKLKM*