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SCNpilot_expt_300_bf_scaffold_257_curated

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_257_curated_31
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33221..33502
DNA (282bp) protein (94aa)
Multiple resistance and pH regulation protein F n=2 Tax=Alicycliphilus denitrificans RepID=E8TU18_ALIDB
multiple resistance and pH regulation protein F; K05563 multicomponent K+:H+ antiporter subunit F
Multiple resistance and pH regulation protein F {ECO:0000313|EMBL:AEB85606.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_257_curated_32
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33499..33870
DNA (372bp) protein (124aa)
Na+/H+ antiporter subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TU17_ALIDB
na+/h+ antiporter subunit; K05564 multicomponent K+:H+ antiporter subunit G
Na+/H+ antiporter subunit {ECO:0000313|EMBL:ADU99302.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_257_curated_33
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33880..35667
DNA (1788bp) protein (596aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU16_ALIDB
peptidase m14 carboxypeptidase a
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:ADU99301.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_257_curated_34
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35691..36086
DNA (396bp) protein (132aa)
Putative fluoride ion transporter CrcB n=2 Tax=Alicycliphilus denitrificans RepID=E8TU15_ALIDB
crcb protein; K06199 CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_257_curated_35
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36216..37079
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TU14_ALIDB
conserved hypothetical protein chp00730; K06966
Uncharacterized protein {ECO:0000313|EMBL:ADU99299.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_257_curated_36
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37067..38242)
DNA (1176bp) protein (392aa)
Major facilitator superfamily MFS_1 n=2 Tax=Alicycliphilus denitrificans RepID=E8TU13_ALIDB
major facilitator superfamily mfs_1
Major facilitator superfamily protein {ECO:0000313|EMBL:GAO22604.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_257_curated_37
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38239..39837)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TU12_ALIDB
RmuC-domain-containing protein {ECO:0000313|EMBL:GAO20253.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
RmuC-domain-containing protein; K09760 DNA recombination protein RmuC
SCNpilot_expt_300_bf_scaffold_257_curated_38
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39911..40891)
DNA (981bp) protein (327aa)
Glyoxylate reductase (EC:1.1.1.26); K00090 gluconate 2-dehydrogenase [EC:1.1.1.215]
Glyoxylate reductase {ECO:0000313|EMBL:AEB85613.1}; EC=1.1.1.26 {ECO:0000313|EMBL:AEB85613.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TU11_ALIDB
SCNpilot_expt_300_bf_scaffold_257_curated_39
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40908..42320)
DNA (1413bp) protein (471aa)
Putative transmembrane protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU10_ALIDB
transmembrane protein
ArsB family arsenite-antimonite efflux pump {ECO:0000313|EMBL:GAO22601.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_257_curated_40
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42368..43567)
DNA (1200bp) protein (400aa)
nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Nicotinate phosphoribosyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TU09_ALIDB
SCNpilot_expt_300_bf_scaffold_257_curated_41
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43715..44083)
DNA (369bp) protein (123aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Thioesterase superfamily protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU08_ALIDB
Thioesterase superfamily protein {ECO:0000313|EMBL:ADU99293.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_257_curated_42
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44446..45000
DNA (555bp) protein (185aa)
Phasin family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TU07_ALIDB
phasin family protein
Phasin family protein {ECO:0000313|EMBL:AEB85617.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_257_curated_43
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45280..46329
DNA (1050bp) protein (350aa)
Extracellular solute-binding protein family 1 n=2 Tax=Alicycliphilus denitrificans RepID=E8TU06_ALIDB
ABC transporter substrate-binding protein; K02012 iron(III) transport system substrate-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADU99291.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_257_curated_44
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46443..47201
DNA (759bp) protein (253aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase (EC:1.1.1.178)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Alicycliphilus denitrificans RepID=E8TTB9_ALIDB
Short-chain dehydrogenase {ECO:0000313|EMBL:GAO22596.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_257_curated_45
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48326..49729)
DNA (1404bp) protein (468aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Glutamate--tRNA ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8TTB8_ALIDB
SCNpilot_expt_300_bf_scaffold_257_curated_46
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49726..50940)
DNA (1215bp) protein (405aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48); K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:AEB85742.1}; EC=2.5.1.48 {ECO:0000313|EMBL:AEB85742.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
O-succinylhomoserine sulfhydrylase n=2 Tax=Alicycliphilus denitrificans RepID=E8TTB7_ALIDB
SCNpilot_expt_300_bf_scaffold_257_curated_47
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51029..52537)
DNA (1509bp) protein (503aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyclip
Amidophosphoribosyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAN0_ALIDK
SCNpilot_expt_300_bf_scaffold_257_curated_48
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52601..53089)
DNA (489bp) protein (163aa)
Colicin V production protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTB5_ALIDB
colicin v production protein; K03558 membrane protein required for colicin V production
Colicin V production protein {ECO:0000313|EMBL:ADU99271.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_257_curated_49
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53103..53921)
DNA (819bp) protein (273aa)
Sporulation domain-containing protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTB4_ALIDB
sporulation domain-containing protein; K03749 DedD protein
Sporulation domain-containing protein {ECO:0000313|EMBL:GAO27402.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_257_curated_50
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53931..55283)
DNA (1353bp) protein (451aa)
FolC bifunctional protein (EC:6.3.2.12); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
FolC bifunctional protein {ECO:0000313|EMBL:AEB85746.1}; EC=6.3.2.12 {ECO:0000313|EMBL:AEB85746.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
FolC bifunctional protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAN3_ALIDK
SCNpilot_expt_300_bf_scaffold_257_curated_51
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55302..55688
DNA (387bp) protein (129aa)
Arsenate reductase-like protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTB2_ALIDB
arsenate reductase
ArsC family protein {ECO:0000313|EMBL:GAO27400.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_257_curated_52
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55798..56478
DNA (681bp) protein (227aa)
17 kDa surface antigen n=2 Tax=Alicycliphilus denitrificans RepID=E8TTB1_ALIDB
17 kDa surface antigen {ECO:0000313|EMBL:GAO22588.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
17 kDa surface antigen
SCNpilot_expt_300_bf_scaffold_257_curated_53
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56542..56859
DNA (318bp) protein (106aa)
UPF0345 protein Alide_1507 n=2 Tax=Alicycliphilus denitrificans RepID=E8TTB0_ALIDB
hypothetical protein; K09913 hypothetical protein
UPF0345 protein Alide2_3419 {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_257_curated_54
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56888..58231
DNA (1344bp) protein (448aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5]
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00581}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Argininosuccinate synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTA9_ALIDB
SCNpilot_expt_300_bf_scaffold_257_curated_55
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58327..60309)
DNA (1983bp) protein (661aa)
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAN8_ALIDK
GAF modulated sigma54 specific transcriptional regulator
GAF modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AEB85751.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_257_curated_56
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60497..61003)
DNA (507bp) protein (169aa)
acetone carboxylase gamma subunit; K10856 acetone carboxylase, gamma subunit [EC:6.4.1.6]
Acetone carboxylase gamma subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TTA7_ALIDB
Acetone carboxylase gamma subunit {ECO:0000313|EMBL:AEB85752.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_257_curated_57
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61028..62287)
DNA (1260bp) protein (420aa)
Hydantoinase B/oxoprolinase; K10854 acetone carboxylase, alpha subunit [EC:6.4.1.6]
Hydantoinase B/oxoprolinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAP0_ALIDK
Hydantoinase B/oxoprolinase {ECO:0000313|EMBL:AEB85753.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying items 31-57 of 57 in total

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