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SCNpilot_expt_300_bf_scaffold_599_curated_4

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(2502..3137)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Alicycliphilus denitrificans RepID=E8TYK4_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 211.0
  • Bit_score: 406
  • Evalue 1.20e-110
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 211.0
  • Bit_score: 406
  • Evalue 3.90e-111
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 211.0
  • Bit_score: 406
  • Evalue 1.70e-110

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGACAGCACCCTCGCCCGCGCCACCCGATTCCGCCGACAGCGATCTGCGCCTGGTCGAGCGCACGGTCGCCGGCGACCAGCGGGCCTACGAACTGCTGGTCATCAAGTACCAGCGCCGCATCGAACGCCTGGTGGGGCGCATGGTGCGCGACGTGGACCTGATACCCGACATCACGCAGGAAACCTTCCTGCGGGCGTATCGCGCGCTGCACCAGTTCCGCGGCGAGGCCCAGTTCTACACCTGGCTCTACCGCATTGCCGTGAACACCGCCAAGAAGGCCCTGGTGGACATCAAGCGCAACCCCGTGATCTCGGAAAGCAGCTTGCGCGGCGGCGGCGACGAGGAAGATGAAACTTCCCTGCTGGACCGCGAACTAACCAGCGACGAAACCCCCGAAACCGTGCTCGCGGCCCAGGAAGTGGCGGCGGCGGTGAACGCCGCCATGGAGGCCTTGCCCGAGGATTTGCGCCAGGCCGTGACGCTCAGGGAGATCGAGGGTTTGAGTTATGAGGAGATTTCCGTGGCAATGGCGTGCCCGATCGGGACCGTGCGGTCGCGGATCTTCCGGGCCCGCGAGGCCATATCGGCGAAGGTCAAGCCCTTGCTCGAAAAGCAGTCGGGCAAGCGGTGGTAG
PROTEIN sequence
Length: 212
MTAPSPAPPDSADSDLRLVERTVAGDQRAYELLVIKYQRRIERLVGRMVRDVDLIPDITQETFLRAYRALHQFRGEAQFYTWLYRIAVNTAKKALVDIKRNPVISESSLRGGGDEEDETSLLDRELTSDETPETVLAAQEVAAAVNAAMEALPEDLRQAVTLREIEGLSYEEISVAMACPIGTVRSRIFRAREAISAKVKPLLEKQSGKRW*