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SCNpilot_expt_300_bf_scaffold_310_curated_12

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 16725..17438

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=2 Tax=Alicycliphilus denitrificans RepID=E8TTJ6_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 238.0
  • Bit_score: 460
  • Evalue 1.10e-126
RNA polymerase sigma factor, flia/whig family; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 238.0
  • Bit_score: 460
  • Evalue 3.40e-127
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 238.0
  • Bit_score: 460
  • Evalue 1.50e-126

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGTACACAGCGAAAGGCCAGCTCGACCGGGACGCGCTGTTTCGCCAGCACCTGCCCCTGGTGCGGCGCATCGCGCACCACATGATCGCCAAGCTCCCGCCCAACGTGGAGCTCGATGACCTGGTCCAGGTCGGCATGATCGGCCTGACCGACGCGCTCTCGCGCTACGAGGCGGCCCAGGGCGTGCAGTTCGAGACCTTCGCCAGCCAGCGCATCCGCGGCGCCATGCTCGACGAGCTGCGCGACGGCGACTGGATGAGCCGCGGCGCGCGCAAGAGCCAGAAGGAGATCGAGCAGGCCCTGCACCGCGTGGAGCAGCGCCTGGGCCGCAGCCCCATGGAGTCCGAGATAGCGGCCGAGCTGGGCATGGACCTGGCGGACTACCAGGCCCTGCTGGGCAAGGTGCGCGGCACGCAGCTCGTGTACCTGGAGGACATGGGCGGCGGCGAGGGCGAGGAAGGCTTCCTGGACCGCCACGTGGCCGACGAGGGCGCCGACCCCATGGCCGTGCTGCGCGACCAGCGCCTGCGCGCCTCGCTGGTGGCGGCCATCAAGCAGCTGCCCGAGCGCGAGCAGCACATCATGGGCATGTACTACGAGCACGACATGAACCTCAAGGAAATCGCCGCCGTGCTGGGCGTGACCGAGTCGCGCATATGCCAGCTGCACAGCCAGGCGATTGCGCGGCTGCGGACCAAGATGCGGGGACATTGA
PROTEIN sequence
Length: 238
MYTAKGQLDRDALFRQHLPLVRRIAHHMIAKLPPNVELDDLVQVGMIGLTDALSRYEAAQGVQFETFASQRIRGAMLDELRDGDWMSRGARKSQKEIEQALHRVEQRLGRSPMESEIAAELGMDLADYQALLGKVRGTQLVYLEDMGGGEGEEGFLDRHVADEGADPMAVLRDQRLRASLVAAIKQLPEREQHIMGMYYEHDMNLKEIAAVLGVTESRICQLHSQAIARLRTKMRGH*