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SCNpilot_expt_300_bf_scaffold_310_curated_88

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(98019..99014)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 331.0
  • Bit_score: 635
  • Evalue 1.10e-179
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 331.0
  • Bit_score: 635
  • Evalue 4.70e-179
DNA-directed RNA polymerase subunit alpha n=2 Tax=Alicycliphilus denitrificans RepID=E8TUF2_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 331.0
  • Bit_score: 635
  • Evalue 3.40e-179

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGCAAACCAATTTGCTGAAACCCAAGGCAATCAACGTCGAACAGCTTGGCCACAACCGCGCCAAGGTCGAACTGGAGCCTTTCGAGCGTGGCTACGGCCACACGCTGGGCAACGCCATCCGGCGTGTCCTGCTCTCGTCCATGGTGGGTTACGCAGCAACCGAGGTGACGATTGCCGGTGTCTTGCACGAGTACTCGTCCATCGACGGTGTCCAGGAGGATGTGGTCAGCATCCTGCTGAACCTCAAGGGAGTGGTGTTCAAGCTCCACAACCGCGACGAGGTCACGCTCAGCCTGCGCAAGGACGGCGAAGGCGTCGTGACAGCGCGCGACATCCAGACGCCCCACGACGTCGAGATCGTCAACCCCGACCACGTGATCGCCACCCTGTCTGCCGGCGGCAAGCTGGACATGCAGATCAAGGTCGAGAAGGGCCGCGGCTACGTGCCGGGCAACCTGCGCCGCTTTGCGGACGAGTCGACCAAGTCGATCGGCCGCATCGTGCTGGACGCGTCCTTCTCGCCCGTCAAGCGTGTGAGCTACACGGTGGAGAGCGCCCGCGTCGAGCAGCGCACCGATCTGGACAAGCTGGTCCTGGAGATCGAGACCAACGGCGCCATCTCGGCCGAGGAGGCAGTGCGTGCGTCCGCCAAGATCCTGGTCGAGCAACTGGCGGTGTTCGCCCAGCTCGACGGCGGCGAGATCTTCGAGAACCAGGCCTCGGGCGCACGGGCGGCCAGCGGCGCCACCTTCGACCCGATCCTGCTGCGTCCCGTGGACGAGCTCGAACTCACGGTGCGCTCGGCCAACTGCCTCAAGGCCGAGAACATCTACTACATCGGCGACCTCATCCAGCGCACCGAGAACGAACTGCTCAAGACCCCCAACCTGGGCCGCAAGTCGCTCAACGAGATCAAGGAAGTCCTGGCCTCGCGCGGTCTCACGCTGGGCATGAAGCTGGAGAACTGGCCGCCGGCTGGTCTCGACAAGCGTTAA
PROTEIN sequence
Length: 332
MQTNLLKPKAINVEQLGHNRAKVELEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAGVLHEYSSIDGVQEDVVSILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEIVNPDHVIATLSAGGKLDMQIKVEKGRGYVPGNLRRFADESTKSIGRIVLDASFSPVKRVSYTVESARVEQRTDLDKLVLEIETNGAISAEEAVRASAKILVEQLAVFAQLDGGEIFENQASGARAASGATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVLASRGLTLGMKLENWPPAGLDKR*