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SCNpilot_expt_300_bf_scaffold_734_curated_19

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(10698..11318)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=2 Tax=Alicycliphilus denitrificans RepID=E8TVH8_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 404
  • Evalue 6.00e-110
50S ribosomal protein L4/L1e; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 404
  • Evalue 1.90e-110
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 404
  • Evalue 8.50e-110

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGCAGCTCGAACTCCTGAATGAACAAGGCCAGGCCGCGTCCAAGGTGGACGTGCCCGAGACCGTGTTCGACCGCCAGTACAACGAAGACCTGATCCACCAGATCGTCGTCGCCTACCAGGCCAATGCCCGCCAGGGCACGCGCGCCCAGAAGGACCGCGAGCAGGTCAAGCACTCGACCAAGAAGCCCTTCAAGCAGAAGGGCACCGGCAACGCACGTGCCGGTATGACCTCCTCGCCTCTGTGGCGTGGGGGCGGTCGCATCTTCCCGAACCTGCCCGAAGAAAACTTCACGCAGAAGATCAACAAGAAGATGTACCGCGCCGGCATGGCCGCCATCCTGTCGCAGCTGGCCCGCGAAGGCCGCCTGGCGGTGGTGGACTCGCTCAAGCTCGAAAGTCCCAAGACCAAGGTGCTGGCCGACAAGTTCAAGGCCATGAACCTGCAATCGGTGATGGTGATCGCCGATGAGGTCGATGAGAACCTGTACCTCGCCTCGCGCAATCTGAAGAACGTGTTCGTCGTCGAGCCGCGTTACGCAGACCCCGTGTCGCTGGTGCATTACAAGAAAGTGCTCGTCACCAAGGGCGCGATCGACAAACTCAAGGAGATGTTCGCATGA
PROTEIN sequence
Length: 207
MQLELLNEQGQAASKVDVPETVFDRQYNEDLIHQIVVAYQANARQGTRAQKDREQVKHSTKKPFKQKGTGNARAGMTSSPLWRGGGRIFPNLPEENFTQKINKKMYRAGMAAILSQLAREGRLAVVDSLKLESPKTKVLADKFKAMNLQSVMVIADEVDENLYLASRNLKNVFVVEPRYADPVSLVHYKKVLVTKGAIDKLKEMFA*