ggKbase home page

SCNpilot_expt_300_bf_scaffold_5828_curated_1

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 1..1869

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 622.0
  • Bit_score: 1232
  • Evalue 0.0
deoxyxylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 622.0
  • Bit_score: 1232
  • Evalue 0.0
1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8U276_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 622.0
  • Bit_score: 1232
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1869
CTCGAACGCGTGAACGACCCGGCCGACCTGCGCCGGCTGTCGCGCGCCGAGCTCAAGAGCCTGGCTGGCGAGCTGCGCGCCTTCGTGCTGGAGAGCGTCTCCAAGACCGGTGGCCACCTGTCGTCCAACCTGGGCACGGTGGAGCTCACCGTGGCGTTGCACGCCGTGTTCGACACGCCGCGCGACCGCCTGGTGTGGGACGTGGGCCACCAGACCTACCCGCACAAGATCCTCACCGGCCGGCGCGAGCGCATGGGCACGCTGCGCCAGCTCGGCGGCCTGTCGGGCTTCCCGCAGCGCGCCGAGAGCGAGTACGACACCTTCGGCACGGCGCACTCGTCCACCAGCATCTCGGCCGCGCTGGGCATGGCGCTGGCGGCCAAGCAGAAGGGCGAGGACCGCCGCGCGATCGCCGTGATCGGCGACGGCGCGATGACGGCCGGCATGGCCTTCGAGGCGCTCAACAACGCGGGCGTGGCAGACGCCGACCTGCTCGTCATCCTCAACGACAACGACATGAGCATCAGCCCGCCCGTGGGTGCGCTCAACCGCTACCTCGCGCAGCTCATGAGCGGCCAGTTCTACGCCAAGGCGCGCGACGTGGGCAAGAGCGTGCTCAGGAACGCGCCGCCGCTGCTCGAACTCGCCAAGCGCCTGGAGCAGCAGGCCAAGGGCATGGTGGTGCCGGCCACGCTGTTCGAGAAGTTCGGCTTCAACTACATCGGCCCCATCGACGGGCACGACCTCGACTCGCTCATCCCCACGCTGGAGAACATCAGGAGCCTCAAGGGCCCGCAGTTCCTGCACGTGGTCACCAAGAAGGGCCAGGGCTACAAGCTCGCCGAGGCCGACCCCGTGGCCTACCACGGCCCCGGCAAGTTCGACCCGCGCGTGGGCCTGGTCAAGCCCGCCACGCCGCCGAAGCAGACCTTCACCCAGGTCTTCGGCCAATGGCTGTGCGACATGGCCGCCAAGGACCAGCGCCTCGTGGGCATCACGCCGGCCATGCGCGAGGGCTCGGGCATGGTGGAGTTCCACCAGCGCTTCCCCGGCCGCTACTACGACGTGGGCATTGCCGAGCAGCATGCCGTGACCTTCGCCGCGGGCATGGCCTGCGAGGGCGTGAAGCCCGTCGTGGCCATCTACTCGACCTTCCTGCAGCGCGCTTACGACCAGCTCATCCACGACGTGGCGCTGCAGAACCTGCCCGTGGTCTTCGCGCTCGACCGCGCGGGCCTCGTGGGCGCGGACGGCGCCACGCACGCGGGCGCTTACGACATCGCCTTCGTGCGCTGCATCCCCCACATGAGCATGGCCTGCCCCGCCGACGAGCGCGAATGCCGCCAGCTGCTCACCACCGCCTACGAGCAGGATCACCCCGTGGCCGTGCGCTACCCGCGCGGCGCCGGCGTGGGCGTGGCGCCGCTGGCCGGCCTGGAGGGCCTGCCCTTCGGCAAGGGCGAGGTGCGCCGCCAGGGCCGGCGCATCGCCATCCTGGCCTTCGGCACGCTGCTGTACCCGGCGCTGCAGGCGGCCGAGAAGCTCGACGCCACGGTGGTCAACATGCGCTGGGCCAAGCCGCTGGACACCGAGCTGCTGCTGCGCGTGGCGGCCGAGCACGAGGCCCTGGTCACCGTGGAGGAGGGCTGCATCATGGGCGGCGCGGGCAGCGCGGTGGGCGAGGCGCTCAACGCCGCGGGCGTGCTGCGCCCGTTGCTGCAGCTGGGCCTGCCCGATGCATTCATCGAGCATGGCGACCCCGCCAGGCTGCTGGCCCTGCAGGGCCTGGACGCCGAAGGCATGGAGCGCGCCATCGCGCAGCGTTTCTGCGCCAGGCCGGCGGCCGTGCCGTCGCGCGCCGTGGCATGA
PROTEIN sequence
Length: 623
LERVNDPADLRRLSRAELKSLAGELRAFVLESVSKTGGHLSSNLGTVELTVALHAVFDTPRDRLVWDVGHQTYPHKILTGRRERMGTLRQLGGLSGFPQRAESEYDTFGTAHSSTSISAALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNAGVADADLLVILNDNDMSISPPVGALNRYLAQLMSGQFYAKARDVGKSVLRNAPPLLELAKRLEQQAKGMVVPATLFEKFGFNYIGPIDGHDLDSLIPTLENIRSLKGPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPRVGLVKPATPPKQTFTQVFGQWLCDMAAKDQRLVGITPAMREGSGMVEFHQRFPGRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFVRCIPHMSMACPADERECRQLLTTAYEQDHPVAVRYPRGAGVGVAPLAGLEGLPFGKGEVRRQGRRIAILAFGTLLYPALQAAEKLDATVVNMRWAKPLDTELLLRVAAEHEALVTVEEGCIMGGAGSAVGEALNAAGVLRPLLQLGLPDAFIEHGDPARLLALQGLDAEGMERAIAQRFCARPAAVPSRAVA*