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SCNpilot_expt_300_bf_scaffold_354_curated_38

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(37428..38078)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 216.0
  • Bit_score: 442
  • Evalue 8.60e-122
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 216.0
  • Bit_score: 442
  • Evalue 3.80e-121
3-isopropylmalate dehydratase small subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TYG5_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 216.0
  • Bit_score: 442
  • Evalue 2.70e-121

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGCAGAAATTCACCATCCACCAGGGCCTGGTCGCTCCCATGGACCGCGAGAACGTCGATACCGACGCCATCATCCCCAAGCAGTTCCTCAAGTCGATCAAGAAGACGGGCTTCGGCCCCAACCTGTTCGACGAATGGCGCTACCTGGACAAGGGCGAGCCCGGCGTGCCCGAGAGCCAGCGCAAGCCCAACCCCGACTTCGTGCTGAACCAGCCGCGGTACAAGGGCGCCTCCATCCTGCTGGCGCGCAAGAACTTCGGCTGCGGCTCCAGCCGCGAGCACGCGCCCTGGGCGCTGGACCAGTACGGCTTTCGCGCCATCATCGCGCCGAGCTTCGCCGACATCTTCTTCAACAACTGCTTCAAGAACGGCCTGCTGCCCATCGTGCTGCCCGAGGCCACGGTGGACCTGCTGTTCAACGAGGTCGCGGCCTTCCCCGGCTACCAGCTGACCATCGACCTGGAGCGCCAGGTCGTGATCCGCCCCCAGGGCGAGGAAATCGCCTTCGACGTGATCCCGTTCCGCAAGTACTGCCTGCTCAATGGCTTCGACGACATCGGCCTGACCCTGCGCCACAAGGACAAGATCGCCGCCTTCGAGGCCGAGCGCCTGGCCACCAAGCCCTGGCTGGCCCACACCATGGCATCCTGA
PROTEIN sequence
Length: 217
MQKFTIHQGLVAPMDRENVDTDAIIPKQFLKSIKKTGFGPNLFDEWRYLDKGEPGVPESQRKPNPDFVLNQPRYKGASILLARKNFGCGSSREHAPWALDQYGFRAIIAPSFADIFFNNCFKNGLLPIVLPEATVDLLFNEVAAFPGYQLTIDLERQVVIRPQGEEIAFDVIPFRKYCLLNGFDDIGLTLRHKDKIAAFEAERLATKPWLAHTMAS*