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SCNpilot_expt_300_bf_scaffold_319_curated_1

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 45..782

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase Rsu; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 245.0
  • Bit_score: 477
  • Evalue 2.70e-132
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 245.0
  • Bit_score: 477
  • Evalue 1.20e-131
Pseudouridine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TWW0_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 245.0
  • Bit_score: 477
  • Evalue 8.70e-132

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCAGTTCCAAGACATCCTTTATTCGCAAGGTTTCGGTACCCGCCGCATTTGCGCGGGCTTGATTCAGCAGGGCTGGGTGGCCGTGCACAGTGCCGGCTCGCCGGAGCCGGTCGTTTGCCTTGAGCCGGCACAGGATTTCGAGGAACAGGGGCTGGTGCTGCGTGTGCAAGGCCAGGACTGGCCGTATCACGCCAAGGCCTATGTGATGCTGAACAAGCCTGCCGGCACGGAATGTTCCCAGAAGCCCTCTGCCTATCCCAGCGTGTATACGCTGCTGCCCGCTCCGCTGCGGCAGCGGCCCGGCAAGAGTGCCGTGAGCGGGGTGCAGGCCGTGGGGCGGCTGGACCAGGACACGACGGGCCTGTTGCTGCTCAGCGATGATGGGCAATTCATCCATCGCATGAGTTCCCCGAAAAAGCATGTGCCGAAGGTGTACCAGGTGACGGCCAGGCATCCCGTTGATGCGGCGCAGGTCGAGCGCCTGCTGGCCGGCGTGGTGCTCGATGACGACCCCAAACCTGTGCGTGCGGCGGCCTGTGTGCAACGTGACGCGCACCGGATCGACCTGACCTTGACCGAGGGCAAGTACCACCAGGTCAAGCGCATGATCGCGGCGGTGGGCAATCGCGTGGAGGCCCTGCATCGCGCCCGCATCGGGGGGCTGGAACTCCCGGTGGACATGGCGCCGGGCCAATGGCGCTGGCTGGGCCCGGATGAGCTTGCGCTGCTGAAATGA
PROTEIN sequence
Length: 246
MQFQDILYSQGFGTRRICAGLIQQGWVAVHSAGSPEPVVCLEPAQDFEEQGLVLRVQGQDWPYHAKAYVMLNKPAGTECSQKPSAYPSVYTLLPAPLRQRPGKSAVSGVQAVGRLDQDTTGLLLLSDDGQFIHRMSSPKKHVPKVYQVTARHPVDAAQVERLLAGVVLDDDPKPVRAAACVQRDAHRIDLTLTEGKYHQVKRMIAAVGNRVEALHRARIGGLELPVDMAPGQWRWLGPDELALLK*