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SCNpilot_expt_300_bf_scaffold_422_curated_5

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(3235..5160)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor interaction domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1S9_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 641.0
  • Bit_score: 1260
  • Evalue 0.0
sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 641.0
  • Bit_score: 1260
  • Evalue 0.0
Fis family sigma-54 specific transcriptional regulator {ECO:0000313|EMBL:GAO23232.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 641.0
  • Bit_score: 1260
  • Evalue 0.0

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1926
ATGCCATGGAACACCTCGAAGCCTTCTGACAGCGCCCCGGCCGACGTCGCGCTGATCGAACGCTCGCTGCTGCGCTCTTTCGAGCTGCACCGGCTGGACCCGGGGCGCGGCGAACCTCCGCGCGTGCTGACCACCACCGCGCTCAAGGACCATCGCGAACCCATGGAGCGCTTCATGCGCATCGCCCGCGGCGGCATGGAGGCGCTGTTCGGCCAGGTCCGCGACGCGGGCTATGTGGTGTTGCTGGCCGACACGCATGGCGTGGCGGTGGATTTCATCGGCAATCCGCTGTTCGACCAGGACTGGCGGCGCGCCGGGCTGTGGCTGGGCAGCTGCTGGACCGAGGAGAAGGAGGGCACCTGCGCGGTGGCGCTGGCGAACCTGGAGCAGCGGGCCATCACCGTGCACCATGCGGAGCATTTCCGCGCGCCCAACAAGACGCTGACCTGCAGCGCCGTGCCCATCTTCGCGCCCGACGGGCGGCCGCTGGCGGTGCTCGACGCCTCGGCGATGGAGTCGCCCGACGACCGGCGCAGCCAGCACCTGGTGCTGCAGATGGTGCAGTCCGCGGCGCGCATGGCCGAGGATGCGAACTTCCTGCACGAGTTCGAGCACCACCACGTGCTCAAGCTCGCGCGGCGGCGCGATTTCCTCGAAGTCTCGGCCGACGGCATGGTCGTGCTCGACGAGACGGGGCGGATCGTGGCGATCAGCCAGTCGCTGCGCGAGCAGGGCGCGCTGGTCGCGGCCCTGGGCCGCAGCGTCGAAGAGGTGTTCGACCACCGCTTCGAGCAGGTGGCCGACGCGGCGCGGCAGGGCGGCTATCCGTTGGCGATGCGCCACCTGCCGACCGGAACGCAGTGCTTTGCGCTCGTGCGGCCGCCGCGCCGGCGGCCGTCCGCGGCACCGGCGCAGGCATCGCCCGCCATGGCGGGCGCGGATGCGCTGCAGGCCATTGCCGGCCACGATCCGCAGATGCAGACCAATGTGCGGCAGGCGCTGCGCGTGCTCGACAAGGGGCTGGCGATCCTGCTGCATGGCGAATCCGGCTCGGGCAAGGAGGCCTTTGCCAAGGCCATGCACGAGGCCAGCGCGCGCAGGGCCCGGCCCTTCGTGGCGGTGAACTGCGCGGCGATTCCCGAGACCCTGATCGAGAGCGAATTGTTCGGCTACCGCGAGGGCGCGTTCACCGGCGCCCGGGCCAAGGGCGCGCGCGGCAAGATCGTGCAGGCCCATGGCGGCACGCTCTTCCTCGACGAGATCGGCGACATGCCGCAGGCCATGCAGACGAGGCTGCTGCGCGTGCTGGCCGAGCGCGAGGTGACGCCGCTGGGCTCGGAGCAGCCCGTCGCCGTCGATGTGCAGCTGATCTGCGCCACGCACCGCGACCTGCGCGGGATGGTGGCCCAGGGGCAGTTCCGGCTGGATCTGTACTACCGTCTCAACAGCGTGACGCTGGAGTTGCCGGCGCTGCGCGATCGCGCCGACAAGGGGCTGCTCATCGAGCGCCTGCTGCGCGAGGACGGGCAGCAGCTCTACGGCCGCGCCGTGGTCATCACCGAGGCCGCGCGCCAGCTGCTGCTGCGCCACGACTGGCCGGGCAATATCCGGCAGCTGAAGAACGTGCTGCGCACGGCGATGGCGCTGAGCAGCGGCGAAGCCGTGGGCCCGGAGCATCTGCCGGCCGAAATCCGGGGCGGCCAGCCGGCCATGCTGCCGCCCGAGCGGATGCTGTCGCTGGGCGGGGTGGATGCGGAGACCGCCGTCCCGGGCGCGCCGGGCGGGCGCGACGCGCTGCTGCAGGCGCTGAAGGCCCACCAGTGGAACGTGACCGAGACGGCGCGCAGCCTGGGGCTATGCCGCGCCACGGTGTACCGGCATATGCAGAGGTGGGAGATCGTCAGCCCCAACCGGCTGGGGCATTGA
PROTEIN sequence
Length: 642
MPWNTSKPSDSAPADVALIERSLLRSFELHRLDPGRGEPPRVLTTTALKDHREPMERFMRIARGGMEALFGQVRDAGYVVLLADTHGVAVDFIGNPLFDQDWRRAGLWLGSCWTEEKEGTCAVALANLEQRAITVHHAEHFRAPNKTLTCSAVPIFAPDGRPLAVLDASAMESPDDRRSQHLVLQMVQSAARMAEDANFLHEFEHHHVLKLARRRDFLEVSADGMVVLDETGRIVAISQSLREQGALVAALGRSVEEVFDHRFEQVADAARQGGYPLAMRHLPTGTQCFALVRPPRRRPSAAPAQASPAMAGADALQAIAGHDPQMQTNVRQALRVLDKGLAILLHGESGSGKEAFAKAMHEASARRARPFVAVNCAAIPETLIESELFGYREGAFTGARAKGARGKIVQAHGGTLFLDEIGDMPQAMQTRLLRVLAEREVTPLGSEQPVAVDVQLICATHRDLRGMVAQGQFRLDLYYRLNSVTLELPALRDRADKGLLIERLLREDGQQLYGRAVVITEAARQLLLRHDWPGNIRQLKNVLRTAMALSSGEAVGPEHLPAEIRGGQPAMLPPERMLSLGGVDAETAVPGAPGGRDALLQALKAHQWNVTETARSLGLCRATVYRHMQRWEIVSPNRLGH*