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SCNpilot_cont_1000_p_scaffold_1045_curated_9

Organism: scnpilot_dereplicated_Alphaproteobacteria_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 10 / 38
Location: 12973..13470

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator id=2555656 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 167.0
  • Bit_score: 269
  • Evalue 2.40e-69
Transcription factor CarD-like protein {ECO:0000313|EMBL:EKE09129.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 166.0
  • Bit_score: 269
  • Evalue 3.40e-69
transcriptional regulator; K07736 CarD family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 160.0
  • Bit_score: 206
  • Evalue 7.90e-51

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 498
ATGGCGAAATCATCATCTTTTTCATGTGGACACCATGTGGTTTATCCAGCACACGGCATTGGAAAAATTAAATCAATAGAAACACATGAGGTTGCCGGACATACTCTTGAAATGTTTGTGATCTCTTTTGAAAAAGATCGGATGACTTTACGTCTTCCTGTTGCTAAAGCAAAAACCTCTGGGTTGCGACCTGTGTGTACAACAAAAGAAATGGCCACTGCTATCAATACTTTAAAAATACGCGGGCGTGCGAAACGCAATATGTGGAGCAGGCGAGCTCAAGAATACGAAGCAAAAATTAACTCAGGCAATCCTATTTCATTGGCAGAAGTTGTGCGTGAGCTTTACAGGACTGCAAATCAGCCAGATCAATCTTATAGTGAACGGCAAGTTTATCAAAACGCTCTCATGCGTCTAGCAGGAGAAATTGCGGCCGTCGAAAATATTGAAACAGAACATGCTATTCAAAAAGTTGAGACAATTTTAGAAGCGGCGTAA
PROTEIN sequence
Length: 166
MAKSSSFSCGHHVVYPAHGIGKIKSIETHEVAGHTLEMFVISFEKDRMTLRLPVAKAKTSGLRPVCTTKEMATAINTLKIRGRAKRNMWSRRAQEYEAKINSGNPISLAEVVRELYRTANQPDQSYSERQVYQNALMRLAGEIAAVENIETEHAIQKVETILEAA*