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SCNpilot_cont_1000_p_scaffold_32_curated_20

Organism: scnpilot_dereplicated_Alphaproteobacteria_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 10 / 38
Location: comp(22460..25906)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 999.99
  • Bit_score: 1724
  • Evalue 0.0
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 999.99
  • Bit_score: 1238
  • Evalue 0.0
Transcription-repair coupling factor id=4799281 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 999.99
  • Bit_score: 1724
  • Evalue 0.0

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 3447
ATGGCCTTTCTCCCCTCCCTCACACCCCCAGCCCTTTTGACAAACGTTCCCGATGGATACGACACTTTGCTCTTGTCAGAACTTGCCAAGGGAGAAGAACACGTCGTGTTTATTGCGCGAGACGAAGGGCGGGCCCAGCGCCTGAAAGAACAGCTTGCTTTTTTTGACACCTCTCGTGAAATTCTTCTCTTCCCTGCTTGGGATTGCTTGCCCTATGATCGAACCTCACCTCACCCCGATATCTTAGCCCAAAGGCTGAACACACTTACGTATCTAACGTCTCAAAACAGCCCTTATCTTCTTATCACCACTATTCAAGCCCTTTTACAAAAACTTCCTCCTCGGGAAGCCTTTGAGGGAAGGCTCTGGACATTGACGGCTAGTCAGGAAGTCGATCATAAGGCCTTCCTCGATTTTCTCCTTAAGGGCGGATATGTGCGCCGTGAAACCGTTCGGGAATGGGGGGAATTCGCCATTCGCGGGGGGCTTCTTGATTTATATCCTCCCGGCTATCCCTTGCCTTTTCGTTTAGATTTTTTTGGCTCAACTTTAGAAAGTATTCGTACCTTCGATCCCCTTTCTCAGATCAGCACAGGAAAAGCAACAGAATTAACGCTTAAGCCCATGGGAGAAATACACTTAACGCCTGAAACCATGGAACGGTTTCGTAAAGGGTATCGAGAGGTTTTTGGCACGCCCGATCCAAAAGACCCTCTCTATCTCTCCATTTCGGAAGAACGTCCCTATGCTGGATACGAACACTGGCTTCCCCTCTTCTATGATCATTTGGAAACACTTCCTGACTATACCACCGGGGCTCTTTATGGCCTGGACGATCAACTTGAGGAAGCCAGATTGTTTCACGTGAAACAAATCCAAGATCATTATGAAACCCGTCTTCAGTTTGAATCTCTTGAAAAACATGGGATTCCTTATCATCCCCTCCCGCCTGAGCGGCTTTACATCATGGATGAGGGGTGGAACACCATGATCCCCGAATCTCGGAAGGTCATCTTCACGCCCTTCTCCCATCCTGATTTCAAAGGAAATACGGTGGATGCCCAAGGGAAAGTAAGCCCATCTTTTGCAAACATCCGAGCCTCTCAGGAAAATGTGTTTGAGGCTGTGAAAGAAACTCTCGAGGGGTACGAAAAAGAAGGGAATCAGGTTCTTCTTGTGGGCGTTACGCAGGGATCTGCAGAGCGCCTTGCCCATATTTTAGAAGAACATCACTTCACCTCGCTGCGGCGTGTGGAATCCTTCTCTGAGGTTTTAAAAGAGTCATCTCCTGCCTTAGCGGCTTTTGAAATGGATCGAGGATTTCAAGCACCTGGTCTCATAGTGCTGACGGAAGAAGACATCTTAGGCGAACGCATGGGGCGGCCCGTCAAGTCCAAAAAGCGGAGTAATCTATTTATTCAGGAAGTTTCAAGCCTTCAAGTGGGGGATCTTGTTGTTCATGTTGAATACGGCATTGGCCGTTATGAGGGTTTAAAAACCCTCAATGTGGGTGGATTTCCCCATGATTGCCTTGAGATTGTCTATGACGGTAATGACAAGCTTTTTGTGCCGGTAGAAAATATTGAAGTTCTCTCTCGCTATGGGGCGGCGGACACCTCAGCATCCTTAGATAAAATGGGAGGAGTGGCTTGGCAATCCCGAAAAGCCCGCGTTAAAAAGCGCCTTAAGGAAGTTGCGGATTATCTTTTAAAAATTGCCGCTGCCCGCAAGCTGCACCAGGCTGATATTCTTCGAAGACAAGACGGATTTTACGAAGAATTTGCAGCCCGTTTTCCCTATCCCGAAACCGATGATCAGCTCTCTGCGATTGAGGATGTGTTTGGAGACTTGGCTGAAGGCAAACCTATGGATCGACTTATCTGTGGGGATGTGGGTTTTGGAAAGACAGAAGTGGCTCTGCGGGCTGCTTTCGTCGCCGCTTCTTCTGGGAAACAAGTGGCTGTTATTGTGCCAACAACGCTTCTTGCACGCCAGCACTATCAATCCTTTACGTCTCGCTTTCAGGATACGGGAATCAAGGTTGCTCAACTCTCGCGGCTTGTGAAACCCAAAGAAGCTGCCCGCATTAAAGAACACTTGAAAAAAGGGGAGATCCAAATTCTTATCGGAACCCACGCCATTTTAGGAAAATCTGTGGAGTTCCACGACCTAGGTCTTTTGATCGTTGATGAAGAACAACACTTTGGGGTGGGTCAAAAAGAAAAACTCAAAAACCTTAAGGCTGATGTTCACGTGCTTACCCTAACCGCCACCCCCATCCCGCGGACCCTTCAAATGGCTCTTTCAGGCGTACGGGAGATGAGTCTCATGACAACGCCACCGCTCGATCGTATGGCCGTGCGGACGTTCGTTTTACCCTTTGATGCAATGGTCATGCGGGAAGCCATTTTAAGGGAGCAATTCCGTGGGGGTCAAACCTTCTATGTTTGTCCACGTGTTTCCGATCTTGATAAAATCGCCGACCGCCTGCGCCAATTCGTCCCTGAAGTCAAATTTGCAGTTGCCCACGGGCAAATGACGCCAACGACCCTCGAGAACGTCATGTCCGATTTTTATGACGGTGCTTTTGATGTGCTTTTAAGCACCAACATCATCGAATCAGGCATCGACATTCCACGGGCTAACACCCTTTTGATTCACCGAGCGGACCTCTTTGGTCTGGCCCAGCTTTATCAACTCAGGGGACGCATTGGTCGCGCAAAAGTTCGAGGCTATGCCTACCTCACCTACCCCGCAGGACAAGTCCTTTCGGGGGATGCTCAAAAGCGTCTTGAAGTCATTCAATCTCTGGATACCCTTGGTGCTGGCTTTACCCTTGCGAGTCACGATATGGATATCCGCGGAACGGGCAATCTTGTGGGGGAAGAACAATCAGGCCACATCCGTGAAGTGGGGATTGAGCTTTACCAACATATGCTGGAGGAAGCCATTGCAGCTCTTAAAGCTGAAGGAAAGGGTGAAGCTTATGTTTCCACGGACTGGACCCCTCAAATCAGCCTGGGCCTTTCCGTTCTTATTCCTGAAAGTTATGTGGCTGATTTAGGCCTTCGTTTGAGCCTTTATAAGCGGTTAACTGATCTTATTACGCGAGAGGAGATTGATCAGTTTGCCATAGAGTTAATGGATCGATTTGGTCCCCTTCCCGTTGAGGTTAAAAACCTTCTCGAGGTGATTTATCTCAAATCCCTTTCCCGCCAAGCCAATGTGGATAAAGTCGAAGTTGGCCCAAAAGGCGTTCTTATTGGATTTTACAAAAATACCTTTAAAAATCCAAATGTACTCATTGGCCATATTACGAATCAAAAAGGCACGGCTAAAATCCGCCCTGATCAAAAAATTGTATATATTAGATCCCTTGAATCCTCTGAAACGCGTCTTACGGCTACCCGTAAGATATTAGAAGATCTGGTTGCGATGGCGGGGTAA
PROTEIN sequence
Length: 1149
MAFLPSLTPPALLTNVPDGYDTLLLSELAKGEEHVVFIARDEGRAQRLKEQLAFFDTSREILLFPAWDCLPYDRTSPHPDILAQRLNTLTYLTSQNSPYLLITTIQALLQKLPPREAFEGRLWTLTASQEVDHKAFLDFLLKGGYVRRETVREWGEFAIRGGLLDLYPPGYPLPFRLDFFGSTLESIRTFDPLSQISTGKATELTLKPMGEIHLTPETMERFRKGYREVFGTPDPKDPLYLSISEERPYAGYEHWLPLFYDHLETLPDYTTGALYGLDDQLEEARLFHVKQIQDHYETRLQFESLEKHGIPYHPLPPERLYIMDEGWNTMIPESRKVIFTPFSHPDFKGNTVDAQGKVSPSFANIRASQENVFEAVKETLEGYEKEGNQVLLVGVTQGSAERLAHILEEHHFTSLRRVESFSEVLKESSPALAAFEMDRGFQAPGLIVLTEEDILGERMGRPVKSKKRSNLFIQEVSSLQVGDLVVHVEYGIGRYEGLKTLNVGGFPHDCLEIVYDGNDKLFVPVENIEVLSRYGAADTSASLDKMGGVAWQSRKARVKKRLKEVADYLLKIAAARKLHQADILRRQDGFYEEFAARFPYPETDDQLSAIEDVFGDLAEGKPMDRLICGDVGFGKTEVALRAAFVAASSGKQVAVIVPTTLLARQHYQSFTSRFQDTGIKVAQLSRLVKPKEAARIKEHLKKGEIQILIGTHAILGKSVEFHDLGLLIVDEEQHFGVGQKEKLKNLKADVHVLTLTATPIPRTLQMALSGVREMSLMTTPPLDRMAVRTFVLPFDAMVMREAILREQFRGGQTFYVCPRVSDLDKIADRLRQFVPEVKFAVAHGQMTPTTLENVMSDFYDGAFDVLLSTNIIESGIDIPRANTLLIHRADLFGLAQLYQLRGRIGRAKVRGYAYLTYPAGQVLSGDAQKRLEVIQSLDTLGAGFTLASHDMDIRGTGNLVGEEQSGHIREVGIELYQHMLEEAIAALKAEGKGEAYVSTDWTPQISLGLSVLIPESYVADLGLRLSLYKRLTDLITREEIDQFAIELMDRFGPLPVEVKNLLEVIYLKSLSRQANVDKVEVGPKGVLIGFYKNTFKNPNVLIGHITNQKGTAKIRPDQKIVYIRSLESSETRLTATRKILEDLVAMAG*