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SCNpilot_cont_300_bf_scaffold_1917_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(6499..6846)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=2 Tax=Oligotropha carboxidovorans RepID=RL20_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 115.0
  • Bit_score: 163
  • Evalue 1.00e-37
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 115.0
  • Bit_score: 163
  • Evalue 3.20e-38
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 115.0
  • Bit_score: 163
  • Evalue 1.40e-37

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGTCACGTTCACCACGCGCCGTTCCTTCACACCTGCGCCGCAAGCGCGTTCTGAAGCAGGCCAAGGGCTTCCGCGGCCGCCGCAAGAACACGATCACCAACGCCAATGCCGCGGTCGACCGGTCGCTGCAATACGCCTATATCGGGCGCAAGCTGCGGAAGCGGAACTTTCGCGCCTTGTGGATTCAGCGCATCAACGCGGCCTGCCGCGAACACGGCCTGACCTACAGCCGATTTATCAGCGGGCTTGCCAAGGCGGGCGTCGAAGTGGATCGCAAGGTTCTGGCCGATCTCGCCGTGCACGAGCCCGCAGCCTTCAAGGCGCTGGTGGATCAGGCGACCGCGTAA
PROTEIN sequence
Length: 116
MSRSPRAVPSHLRRKRVLKQAKGFRGRRKNTITNANAAVDRSLQYAYIGRKLRKRNFRALWIQRINAACREHGLTYSRFISGLAKAGVEVDRKVLADLAVHEPAAFKALVDQATA*