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SCNpilot_cont_300_bf_scaffold_1539_curated_29

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(26493..27017)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF1D4B related cluster n=1 Tax=unknown RepID=UPI0003CF1D4B similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 178.0
  • Bit_score: 299
  • Evalue 3.00e-78
Conjugal transfer protein TrbF {ECO:0000313|EMBL:ESY62548.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 178.0
  • Bit_score: 299
  • Evalue 4.20e-78
type IV secretory pathway, TrbF component similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 178.0
  • Bit_score: 297
  • Evalue 3.60e-78

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
CTGGCCGGCGGGCTGGTCTGGCAATCCGAACGCGGCGCCATCGTCCCGTGGGTGGTGCAGATCGATCCGCACGGACAGGCGCAGGCGATCGCTCCCGCCACCGCCGATTATCAACCCACCGATCCGCAGATCGCCTGGTATCTGGCGCGCTTCGTCGAAGAAGTCCGCTCGCTTCCGGACGATGCCATCGTCGTGCGCCAGAACTGGCTGCGCGCCTATGACTTCACCACCGAGCAGGGCGCGCTCGCACTCAATGATTATGCCCGCGCCAACGATCCGTTCAGCCGCGTAGGCAAAGAGCAGGTCGCGGTCGACATCTCCAGCGTCATCCGCGCCTCGCCCGACAGCTTCCGCGTCGCCTGGGTCGAGCGCCGCTACCAGGACGGCAGCCTCGCCGGCACCGCCCATTGGACCGCCATCCTCACCATCGTCCTCCAGCCGCCGCAGGACGCCGAGCGGCTGCGCAAAAATCCCCTCGGCGTCTACGTCACCGCCATCAACTGGTCGAAGGAGCTGGACCAATGA
PROTEIN sequence
Length: 175
LAGGLVWQSERGAIVPWVVQIDPHGQAQAIAPATADYQPTDPQIAWYLARFVEEVRSLPDDAIVVRQNWLRAYDFTTEQGALALNDYARANDPFSRVGKEQVAVDISSVIRASPDSFRVAWVERRYQDGSLAGTAHWTAILTIVLQPPQDAERLRKNPLGVYVTAINWSKELDQ*