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SCNpilot_cont_300_bf_scaffold_5057_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: 1513..2958

Top 3 Functional Annotations

Value Algorithm Source
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXV3_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 483.0
  • Bit_score: 713
  • Evalue 1.10e-202
nitrogen metabolism transcriptional regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 483.0
  • Bit_score: 713
  • Evalue 3.40e-203
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family {ECO:0000313|EMBL:ABS64736.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 483.0
  • Bit_score: 713
  • Evalue 1.50e-202

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
ATGCCCGCCGGAACCATTCTCGTCGCCGACGACGACGCCGCCATCCGCACCGTGCTCAATCAGGCGCTGGGGCGCGCCGGTTATGATGTGCGCACCACGGGCAGCGCGGCTGGCCTGTGGCGCTGGGTTGCCTCGGGCGAGGGCAATCTCGTCATCTCCGATGTGGTGCTGCCGGATGAAAACGGCTTCGACCTGATCCCGCGCATCAAGCGCACACGCCCCGATCTGCCGGTGGTGGTGATGAGTGCGCAGAACACGCTTCTCACCGCGATCACGGCGGCGGAGCGTGGTGCCTTTGAATATCTGCCCAAGCCATTCGATCTGCGCGAACTGATCGCGGTGGTGCAGCGCGCACTGGCCGCGCCGCAGACCAAACGCAACAATGGCAGTGCGGCGGAGAACAGCGATGACCGCCTGCCGTTGATCGGGCGTTCGCCCGCGATGCAGGAAATCTACCGCACCATTGCGCGGCTGACGCAGACCGATCTGACCGTGACCATCATGGGGGAATCCGGCACCGGCAAGGAACTGGTGGCCCGCGCCCTGCATGATTACGGCAAGCGCCGCCATGGTCCCTTCGTGGCCGTGAATATGGCCGCCATCCCGAAGGAATTGGTGGAAAGTGAGTTGTTCGGGCATGAGCGCGGCGCCTTTACCGGCGCCACCGCACGCGGTGTCGGCCGCTTTGAACAGGCTGAGGGCGGCACCCTGTTCCTCGACGAAATCGGCGACATGCCGCTCGATGCGCAAACCCGGCTGCTGCGCGTGTTGCAGCAGGGCGAATACACCGCGGTTGGCGGCCGCGTCGCGATCAGGACCGATGTGCGTATTATCGCGGCCACAAACCGCGATCTGCGTCAGCTCATTCATCAGGGGCTGTTCCGCGAAGACCTCTATTACCGGCTGAATGTGGTGCCGCTGCGCCTGCCGCCCCTGCGCGAGCGGACGGAGGACATTCCCGATCTCGTCCGCCATTTCCTGCGCAAGGCGGAGGAGGAGGGCCTGCCGGTCAAGAATCTCGATGCCGAAGGCCTTGACCTGATGAAGCATTACCGTTGGCCGGGCAATGTGCGCGAACTGGAAAATCTGGTGCGGCGGCTCGCGGTTTTGCACGCGGGCGAAGATATTCCGGCCAACGTGATTGCCGCCGAATTGCGCGAACCGGCCGTGATGGTGGAAAGCGACGATGCGCCCGGTTCGCTGGCCACGGCGGCGGAGCGTTATCTCGCACAATATTTCCGCTCGCAGGGCGATGGGCTGCCACCACCCGGCCTTTATGATCGCGTGCTGACGGAGGTGGAGCGGCCGCTGATCTCGATCTGCCTTGCCGCCACCCGCGGCAACCAGATCAAAGCGGCGCATCTTCTGGGCCTGAACCGCAATACCTTGCGCAAGAAGATCCGGGACCTTGGTCTGGAAGTGATACGGGGCCTCAAAACCGACTGA
PROTEIN sequence
Length: 482
MPAGTILVADDDAAIRTVLNQALGRAGYDVRTTGSAAGLWRWVASGEGNLVISDVVLPDENGFDLIPRIKRTRPDLPVVVMSAQNTLLTAITAAERGAFEYLPKPFDLRELIAVVQRALAAPQTKRNNGSAAENSDDRLPLIGRSPAMQEIYRTIARLTQTDLTVTIMGESGTGKELVARALHDYGKRRHGPFVAVNMAAIPKELVESELFGHERGAFTGATARGVGRFEQAEGGTLFLDEIGDMPLDAQTRLLRVLQQGEYTAVGGRVAIRTDVRIIAATNRDLRQLIHQGLFREDLYYRLNVVPLRLPPLRERTEDIPDLVRHFLRKAEEEGLPVKNLDAEGLDLMKHYRWPGNVRELENLVRRLAVLHAGEDIPANVIAAELREPAVMVESDDAPGSLATAAERYLAQYFRSQGDGLPPPGLYDRVLTEVERPLISICLAATRGNQIKAAHLLGLNRNTLRKKIRDLGLEVIRGLKTD*