ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8757_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8757_curated_1
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2..187)
DNA (186bp) protein (62aa)
NADH(P)-binding protein, PF13460 family n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3V9U9_9LEPT
NADH(P)-binding protein, PF13460 family {ECO:0000313|EMBL:EPG73210.1}; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str. BUT 6.;"
short-chain dehydrogenase; K07124
SCNpilot_expt_1000_bf_scaffold_8757_curated_2
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(226..1422)
DNA (1197bp) protein (399aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA C-acyltransferase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HN23_9PROT
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:EKV31708.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
SCNpilot_expt_1000_bf_scaffold_8757_curated_3
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1727..2338)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBS3_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB66331.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_8757_curated_4
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2455..3990)
DNA (1536bp) protein (512aa)
AMP-dependent synthetase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEE6_9RHIZ
AMP-dependent synthetase {ECO:0000313|EMBL:AHB48893.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
AMP-dependent synthetase and ligase
SCNpilot_expt_1000_bf_scaffold_8757_curated_5
unknown

Not on your lists

4674..4820
DNA (147bp) protein (49aa)
Acyl carrier protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JF58_HYPSM
Acyl carrier protein {ECO:0000256|RuleBase:RU003545}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
phosphopantetheine-binding protein; K02078 acyl carrier protein
SCNpilot_expt_1000_bf_scaffold_8757_curated_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4888..6123
DNA (1236bp) protein (412aa)
Beta-ketoacyl synthase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BCM8_9RHIZ
beta-ketoacyl synthase
Beta-ketoacyl synthase {ECO:0000313|EMBL:AGK57875.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_8757_curated_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6275..6703
DNA (429bp) protein (143aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D2Q9_PAESJ
Uncharacterized protein {ECO:0000313|EMBL:ETW92585.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
short-chain dehydrogenase/reductase SDR
Displaying 7 items

View Taxonomy