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SCNpilot_expt_1000_bf_scaffold_4535_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4535_curated_1
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..474
DNA (474bp) protein (158aa)
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D920CC
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
SCNpilot_expt_1000_bf_scaffold_4535_curated_2
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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540..992
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EW23_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA16228.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK209-2-6.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4535_curated_3
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1094..1528
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4XB76_PSEDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI22605.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
SCNpilot_expt_1000_bf_scaffold_4535_curated_4
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1608..3512
DNA (1905bp) protein (635aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037BBD46
Uncharacterized protein {ECO:0000313|EMBL:AHB49703.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4535_curated_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3582..4385)
DNA (804bp) protein (268aa)
FAD-binding molybdopterin dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KJY7_9PROT
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:EKE77645.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_expt_1000_bf_scaffold_4535_curated_6
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4389..4871)
DNA (483bp) protein (161aa)
putative carbon monoxide dehydrogenase small subunit; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Putative carbon monoxide dehydrogenase small subunit n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G1R6_9BRAD
Putative carbon monoxide dehydrogenase small subunit {ECO:0000313|EMBL:BAL74703.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_expt_1000_bf_scaffold_4535_curated_7
unknown

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comp(5075..6118)
DNA (1044bp) protein (348aa)
pleC; two component sensor kinase; K07716 two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
Two component sensor kinase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JU52_AGRVS
Uncharacterized protein {ECO:0000313|EMBL:CPR21997.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_4535_curated_8
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6269..6934)
DNA (666bp) protein (222aa)
pepN; aminopeptidase (EC:3.4.11.2); K01256 aminopeptidase N [EC:3.4.11.2]
Aminopeptidase N, a cysteinylglycinase, (Alpha-aminoacylpeptide hydrolase) {ECO:0000313|EMBL:CCB65575.1}; EC=3.4.11.2 {ECO:0000313|EMBL:CCB65575.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Aminopeptidase N, a cysteinylglycinase, (Alpha-aminoacylpeptide hydrolase) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGS8_HYPSM
Displaying 8 items

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