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SCNpilot_expt_1000_bf_scaffold_5893_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5893_curated_1
unknown

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1..75
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5893_curated_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(811..1239)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036DB82E
Uncharacterized protein {ECO:0000313|EMBL:AHB49813.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_5893_curated_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1242..2531)
DNA (1290bp) protein (430aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=6
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037EF2AD
Cfr family radical SAM protein
SCNpilot_expt_1000_bf_scaffold_5893_curated_4
unknown

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2567..3241
DNA (675bp) protein (225aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064166, ECO:0000313|EMBL:CPR19615.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
fabA; 3-hydroxydecanoyl-ACP dehydratase; K01716 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.60]
3-hydroxydecanoyl-ACP dehydratase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S9I5_9RHIZ
SCNpilot_expt_1000_bf_scaffold_5893_curated_5
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3352..4581
DNA (1230bp) protein (410aa)
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:AHB47287.1}; EC=2.3.1.41 {ECO:0000313|EMBL:AHB47287.1};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
fabB; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
3-oxoacyl-ACP synthase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SA31_9RHIZ
SCNpilot_expt_1000_bf_scaffold_5893_curated_6
unknown

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4666..5628
DNA (963bp) protein (321aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094, ECO:0000313|EMBL:CPR19609.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
fabI; enoyl-ACP reductase (EC:1.3.1.9); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]
enoyl-ACP reductase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000376F397
SCNpilot_expt_1000_bf_scaffold_5893_curated_7
unknown

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5914..5988
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 7 items

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