ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4315_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 2939..3538

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J968_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 189.0
  • Bit_score: 254
  • Evalue 7.50e-65
hypothetical protein; K07735 putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 189.0
  • Bit_score: 254
  • Evalue 2.30e-65
UPF0301 protein HYPMC_4174 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 189.0
  • Bit_score: 254
  • Evalue 1.00e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGATGGATCAGGCACGCAAACGTCGCGTCTCGGGGCCGAGCTATCTCAGCGGGCAGCTTCTCGTCGCCATGCCGACGATGGGCGACCGCCGGTTTCGCCGGTCCGTGATTTACATGTGCTCGCATTCGTCCGAGGGGGCGATGGGGCTCATCGTCAATCAGCGCTCGTCGGATGTATCGCTCGGCGATCTCGTCGAGCAGCTCGGAATCGGCGAGGGTGGGGCCGAGGCGTTCCTGGAGCAGAGCGTGCTGAACGGCGGTCCGGTCTCGACCGAGCGCGGCTTCGTCCTCCACACGAATGACTACTTTGCCGAGGAAGCCACGCTCGCCATCAGTGATGGCATCTGCCTGACGGCGACGATCGAGATCTTGAAAGCCATGGCTTCCGGGCAAGGCCCGCGCCGCTCGGTGCTGGCGCTCGGCTACGCGGGGTGGGGGGCTGGTCAGCTCGAGGCCGAGATCGGTGCCAACGGGTGGCTGCACTGTCCGGCCGACCGCGATTTGATTTTCGATACCGACCTCGAGCTCAAGTATGTCCGTGCGCTTTCCAAGATCGGCATCGAGCTCTCTCATCTCCATAGCGAGGCCGGACACGCCTAG
PROTEIN sequence
Length: 200
MMDQARKRRVSGPSYLSGQLLVAMPTMGDRRFRRSVIYMCSHSSEGAMGLIVNQRSSDVSLGDLVEQLGIGEGGAEAFLEQSVLNGGPVSTERGFVLHTNDYFAEEATLAISDGICLTATIEILKAMASGQGPRRSVLALGYAGWGAGQLEAEIGANGWLHCPADRDLIFDTDLELKYVRALSKIGIELSHLHSEAGHA*