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SCNpilot_expt_1000_bf_scaffold_2738_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 3837..4343

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 163.0
  • Bit_score: 259
  • Evalue 4.70e-66
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 161.0
  • Bit_score: 248
  • Evalue 1.40e-63
Diaminopimelate epimerase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBV4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 163.0
  • Bit_score: 259
  • Evalue 3.30e-66

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGGGCCAGCCGCGCTTTGGCTGGCAGGATATTCCGCTGTCCGAGCCCTTTCACGATACGCGCCGCATCGAGCTGCAGGTCGGGCCGGCCGACAAGCCGATCATCCATTCGCCAGCGGTCGTGAATGTCGGCAATCCGCACGCCGTATTCTGGGTCGATGATCCCGCGGTGATCGATCTCGGCCGGATTGGGCCTATGCTGGAGTACCACCCGCTCTTTCCCGAGCGCGCCAACATCTCCATTGCCCGCATCGACAGCCGCGAGGCCATCACGCTGCGCACATGGGAGCGGGGCGCCGGTCTGACGCGCGCCTGCGGTTCGGCGGCGTGCGCGGCGGCGGTTTCTGCGGCGCGCATCGGTCTCACGGATCGCAAGGTGACGGTGACGCTGCCCGGCGGCCCGCTCGTTATCGAGTGGCGCGCGGACAACCACATCATCATGACCGGTCCGGCCGAGCTCGAGCACGAGGGGACGCTCGATCAGATCCCGCTCATGGCAGCGGGCTGA
PROTEIN sequence
Length: 169
MGQPRFGWQDIPLSEPFHDTRRIELQVGPADKPIIHSPAVVNVGNPHAVFWVDDPAVIDLGRIGPMLEYHPLFPERANISIARIDSREAITLRTWERGAGLTRACGSAACAAAVSAARIGLTDRKVTVTLPGGPLVIEWRADNHIIMTGPAELEHEGTLDQIPLMAAG*