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SCNpilot_expt_1000_bf_scaffold_2923_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 6997..7560

Top 3 Functional Annotations

Value Algorithm Source
Ribosome recycling factor n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGQ5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 187.0
  • Bit_score: 262
  • Evalue 4.40e-67
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 187.0
  • Bit_score: 262
  • Evalue 6.20e-67
ribosome recycling factor; K02838 ribosome recycling factor similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 187.0
  • Bit_score: 260
  • Evalue 4.00e-67

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGACAGCGGCGAGCTTCGATATGAACGATCTCGAGCGCCGCATGCGCGGCGTGATCGAGAGCCTGAAGCGGGAGTTCGGCGGCCTTCGGACCGGCCGCGCCTCGGCGAACCTTCTCGATCCCGTGGTGGTCACGGTCTACGGCGCGAAGATGCCCCTCAACCAGGTCGCGACCGTATCCGTTTCCGACGCGCGCACGATCTCCGTCCAGGTCTGGGACAAGAGCCAGGTCGGCGCCGTCGACAAGGCCATCCGCGAGGCGAACCTCGGCCTCAATCCGATCGTCGACGGCACGCTCCTCCGCCTCCCGGTACCGGCCCTCAATGCCGAGCGGCGCCAGGAGCTGGTGAAGCTCGGCCACAAGTATGCCGAGCACGCCCGCGTCGGCGTGCGCAACGTGCGCCGTGACGGCATGGATGTCCTCAAGAAGCTCGAGAAGGATCACAAGATCAGCGAGGACGAGCAGCGCAAGAGTTCGACGAAAGTACAGGAGCTGACCGATCGTCTGATCAAGGACATCGATCAAATGCTGGCGGCTAAGGAAGTCGAGATTAAGCAGGTTTGA
PROTEIN sequence
Length: 188
MTAASFDMNDLERRMRGVIESLKREFGGLRTGRASANLLDPVVVTVYGAKMPLNQVATVSVSDARTISVQVWDKSQVGAVDKAIREANLGLNPIVDGTLLRLPVPALNAERRQELVKLGHKYAEHARVGVRNVRRDGMDVLKKLEKDHKISEDEQRKSSTKVQELTDRLIKDIDQMLAAKEVEIKQV*