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SCNpilot_expt_1000_bf_scaffold_2921_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(2835..3044)

Top 3 Functional Annotations

Value Algorithm Source
P pilus assembly protein, porin PapC n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VNK3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 68.0
  • Bit_score: 79
  • Evalue 1.20e-12
P pilus assembly protein, porin PapC {ECO:0000313|EMBL:EJN01645.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 68.0
  • Bit_score: 79
  • Evalue 1.60e-12
fimbrial biogenesis outer membrane usher protein; K07347 outer membrane usher protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 68.0
  • Bit_score: 71
  • Evalue 1.70e-10

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Taxonomy

Phyllobacterium sp. YR531 → Phyllobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
GTGCCAATCAAGCCTGGCTCGTCGGTCCAGATCGCCGGTCTGCAGGAAGAATTCATCGTTGGCTATGACGGCGAGGCATTCCTGAGCAATCTGAAAGCGCAAAACAGAGTGACGATCGAGCAGGCAGGCGGCGGGACTTGCGCAGCCGAATTTTCCTACGAGGCCGCCCGCGGCACCCAGGTCAAAATCAATGGGGTCGTATGCCAATGA
PROTEIN sequence
Length: 70
VPIKPGSSVQIAGLQEEFIVGYDGEAFLSNLKAQNRVTIEQAGGGTCAAEFSYEAARGTQVKINGVVCQ*