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SCNpilot_expt_1000_bf_scaffold_5041_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(3953..4642)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036F2570 similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 196.0
  • Bit_score: 301
  • Evalue 8.00e-79
Uncharacterized protein {ECO:0000313|EMBL:EKS36606.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 195.0
  • Bit_score: 295
  • Evalue 8.00e-77
DNA-binding transcriptional activator of the SARP family similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 195.0
  • Bit_score: 285
  • Evalue 1.40e-74

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGCCGTACGCCTTGATCCCACGTTTGCGCGCGCCTACGCCGGTCTTTCGTTCACGCACTGGCAGAATGCGTTTCAAGGATGGGCACCACGCGAGCTCGAGACCAATCTCGCCTTCGACGCCGCCGGCAGGAGCCTGATGGCCGACGATCGCGATCCTGCCGCGCATTGGGCCATGGGCCGTGCTCTGTGGCTCAGGAACCAGCATGGCCAATCGGTCGGAGAGCTGGAAACAGCCGTGGACCTCAGCCCGAATTTTGCCGCCGGCCACTATGCGCTCGCATTCGTGCGCTCCCAGGCCGGTGATCCACGGGCGGCCATCGATGCCTCCGACCATTCCCGCCACCTCAGCCCATTCGATCCCCTCCTCTTCGCCATGCTCGGCGCGCGCACCATGGCCCTCGTGCGTCTTCAGGATTTCGAGAGTGCGGCGGACTGGGGTGCGAAGGCCGCATCCCGTCCCAATGCGCACCCGCATGTGCTCGCCATTGGAGCCTACAGCCAGGCGCTCGCCGGCCGCATGGAGGACGCGCAGATCTATGCCGCCTCAATTCGCCGCGCCTTGCCGGACTACTCCGTCGAAGATTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGAACGCGCGCCATTCGCGCGCAAAGCGGTGGTCGCGCCGCCCCCAAGGGCGCTATAG
PROTEIN sequence
Length: 230
MAVRLDPTFARAYAGLSFTHWQNAFQGWAPRELETNLAFDAAGRSLMADDRDPAAHWAMGRALWLRNQHGQSVGELETAVDLSPNFAAGHYALAFVRSQAGDPRAAIDASDHSRHLSPFDPLLFAMLGARTMALVRLQDFESAADWGAKAASRPNAHPHVLAIGAYSQALAGRMEDAQIYAASIRRALPDYSVEDFXXXXXXXXXXXXXXXERAPFARKAVVAPPPRAL*