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SCNpilot_expt_1000_bf_scaffold_6509_curated_16

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 14518..14841

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator LysR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GU24_CUPNN similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 106.0
  • Bit_score: 106
  • Evalue 1.80e-20
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 106.0
  • Bit_score: 106
  • Evalue 5.60e-21
Transcriptional regulator LysR family {ECO:0000313|EMBL:AEI82228.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 106.0
  • Bit_score: 106
  • Evalue 2.50e-20

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Taxonomy

Cupriavidus necator → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
GTGCGCTTGCTGAACCGCACGACGCGCCGCGTCACGTTGACTGCCGAAGGCGAGCGCTACGTCGAGCGCGCGCGCAAAATTCTAGCCGACATCGACGAGTGCGAGGCCGATGTGATTGCACAAGGGGCCGCGCCGCGCGGAGAGCTGCGCGTCGCTTGCGCGACCGGCGTCGGCTTCACGACCATCGTCAGCGCGTTGCCGCGCTTTCGCGAGCGCTATCCCGATGTTCGCATCGAGTTCGCGATCGGCAGCCGCCGCATCGACCTCGTCGAGAATCAGATCGATGTCGCGATCCGGCTCGGTGCGCTGCCCGATAGCTCGTTC
PROTEIN sequence
Length: 108
VRLLNRTTRRVTLTAEGERYVERARKILADIDECEADVIAQGAAPRGELRVACATGVGFTTIVSALPRFRERYPDVRIEFAIGSRRIDLVENQIDVAIRLGALPDSSF