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SCNpilot_expt_1000_bf_scaffold_14021_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 3387..4526

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNY0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 379.0
  • Bit_score: 395
  • Evalue 6.70e-107
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EIM25672.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 379.0
  • Bit_score: 395
  • Evalue 9.40e-107
putative multidrug resistance protein; K07799 putative multidrug efflux transporter MdtA similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 380.0
  • Bit_score: 381
  • Evalue 2.40e-103

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
GTGGCGCTTCTCGCTGCCGCGGGCGTCGCTTGGCAGTATCTCGGGCTGCCCGGGATGCAAAAAGGCGTGGCGGCCCGGTCGCAGCTCGCCGTGAGCGCCACGCCTGTTCAGGCGACGGCCGTCACCACGCGCGACATTCCCGTATTCCTCAATGGGCTTGGGACGGTGCAGGCGACCAACTCGGTTCTGGTCAGATCGCGCGTCGATGGCCAGATCGAGAAAGTCGCCTTCGAGGAAGGCCAGATCGTGTGCCAGGGCGACCTCCTCGTGCAGATCGATCCGGCGCCCTTCCAGGCCACGCTCGATCAGGCGACGGCGAAGCTCGCGCAGGATCAGGCCTCGCTGCTCAATGCCAAGCAGGACTTGCAGCGCACCGCAACGCTCGCCAAGCAAGGTGACGCCACGCAGCAACTGTTCGATCAGCGCACCGCCACCGTCGCGCAGCTCACGGCGCAGATACAGGCGGACCAGGCGGCCATCGAGAGCGCGAAGGTCCAGCTCGCCTATACGACGATCCGGTCGCCGCTGACGGGGCGCGCGGGATTTCGTCTCGTCGATCCGGGCAACATCGTGCACGCGAATGATCAGAACGGCATTCTGACCATCACCCAGCTCACGCCGATCTCGGTGATCTTCACGGCGCCGGAGGGACAGCTTCCGAGCATCAGCGCGGCGCTCAAATCGGGTCCCTTGCAAGTGACGGCCCTCACGTCGGATGGCAGGCGTACGCTCGCGCACGGAACGCTGTCGCTTGTCGACAATCAGGTGGATGCCGCGAGCGGCACGATCCGGCTCAAGGCGAGCTTCGACAATGCCGACAATGCGCTGTGGCCCGGACTGTCGGTGACGACGCGACTGCTCATTTCCACCATCAAGAATGCGGTGGCTGTGCCCGATGTCGCGGTCCAGCGGGGGCCCAATGGCCTCTTCGCCTTCGTCATCAACAAGGACGGCAAGGCGGAGCTTCGCAGCGTCGACATCGGCCCGATCGAGGACGGCTGGGCGGTCGTCGAGCACGGCCTCACGCCAGGAGAGCGCGTCGTCACGGCCGGTCAGTACCGGCTGCAGCCTGCGACGCTCGTCGAGGTTCTCCTGGGCAACAACCAAAGCATGAGCAGCAACACGACGGGCGAGCCATGA
PROTEIN sequence
Length: 380
VALLAAAGVAWQYLGLPGMQKGVAARSQLAVSATPVQATAVTTRDIPVFLNGLGTVQATNSVLVRSRVDGQIEKVAFEEGQIVCQGDLLVQIDPAPFQATLDQATAKLAQDQASLLNAKQDLQRTATLAKQGDATQQLFDQRTATVAQLTAQIQADQAAIESAKVQLAYTTIRSPLTGRAGFRLVDPGNIVHANDQNGILTITQLTPISVIFTAPEGQLPSISAALKSGPLQVTALTSDGRRTLAHGTLSLVDNQVDAASGTIRLKASFDNADNALWPGLSVTTRLLISTIKNAVAVPDVAVQRGPNGLFAFVINKDGKAELRSVDIGPIEDGWAVVEHGLTPGERVVTAGQYRLQPATLVEVLLGNNQSMSSNTTGEP*