ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9744_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 130..603

Top 3 Functional Annotations

Value Algorithm Source
flagellar basal body rod modification protein FlgD n=1 Tax=Rhizobium giardinii RepID=UPI00036DD26F similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 136.0
  • Bit_score: 134
  • Evalue 1.20e-28
Flagellar basal body rod modification protein {ECO:0000313|EMBL:EKF17132.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 132.0
  • Bit_score: 129
  • Evalue 4.00e-27
flgD; flagellar basal body rod modification protein; K02389 flagellar basal-body rod modification protein FlgD similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 129.0
  • Bit_score: 124
  • Evalue 2.20e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitratireductor pacificus → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGGACGTCGCGAGTATCCTGAATACGACCAAGACGACGCAGACGACGCCCGAGACGCAGTCGGCGACTGCAGCGCCGACGCTCGACTACAACGCCTTTCTCCATCTGCTGATCGCGCAAATGCGCAATCAGGACCCGATGGAGCCGATGAAGTCGAGCGACTATGTCGCGCAGCTTGCGACCTTCTCTCAGGTCGAGAAGACCATTCAGACCAACGAGCGCATCGCCTCGCTGCTGAACACGAACAATCTGCAGCTTGCGGAAAACCTCGTCGGCAAGATGGTCATCTCCGACGAGAACAAGACCGGCGGCGTCGTCGTTGCGGCCAAGGTCCTGTCCAATGGCGTGATGGTCCTCCTCGACAACGGTCAGGAGTTCATGGTCGGCCCCGGCCTCATCATCGGCGAGAAGGCAACGCAGCCCCCGGCCGATACCGGCGGCGACAGCAGCGGTGGCGACGAGACCCCCGCGTGA
PROTEIN sequence
Length: 158
MDVASILNTTKTTQTTPETQSATAAPTLDYNAFLHLLIAQMRNQDPMEPMKSSDYVAQLATFSQVEKTIQTNERIASLLNTNNLQLAENLVGKMVISDENKTGGVVVAAKVLSNGVMVLLDNGQEFMVGPGLIIGEKATQPPADTGGDSSGGDETPA*