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SCNpilot_expt_1000_bf_scaffold_6934_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(4283..5080)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport system, permease component II id=4304675 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 256.0
  • Bit_score: 225
  • Evalue 6.50e-56
potCD; spermidine/putrescine transport system permease PotC/spermidine/putrescine-binding periplasmic protein PotD; K11069 spermidine/putrescine transport system substrate-binding protein; K11070 spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 251.0
  • Bit_score: 207
  • Evalue 4.40e-51
Tax=GWC2_RIF_CHLX_73_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 256.0
  • Bit_score: 225
  • Evalue 9.10e-56

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Taxonomy

GWC2_RIF_CHLX_73_18_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 798
ATGACGCGCGAGCAAGGCATCGGGACTTTGGCCCTCGCGGTCTGGACGGCGCTGGTCGTTCTGTTTCTCCTTCTCCCGCTATTCGTGATAGTTGCGTTCTCATTCAATGACAGTGATTTCCCCTCGTTCCCGATGCGGGGCCTGACCCTCAAGTGGTATTGGCGCTTCCTCGAGTCCGACGAACTGCTGGCCGCCCTTTGGAATAGCACGCTCGTAGCATTCGCGACGATGGTTTTGGCGACGACATTCGGGACGCTGGCGGCCATCGGACTAGCCCGCAGTGGAGCGCGCACGCAGAAGTTCATGCGGCCTTTGCTATCGACGCCGATGATGACGCCACGCCTCGTGGTCGGTATCGCGCTGCTCAATATGTTCAACCTGCTTTCGATGCAGCTTTCGCTGCTCACGGTCATCGTTGGGCACACCGTGGTGGCTGTCCCCTACGTCATTCTCGTCGTCAGCGCGCGCCTCGTCGGGCTCGATCCGCGCATCGAGGAAGCCGCGGCCGACCTCGGTGCGACGCGAACTCGCGTGCTCATCGATATACTCCTGCCACTGTTGCGTCCGGCCGTGCTTGGAAGCGCCCTGATTGCCTTCACGCTGAGTTTCGACGAAGTAGTCGTCACCTTTTTCACGACCGGGACCGAGAACACGCTCCCGACTACAATCTGGGCGATGCTGCGATATGGCATTACACCGGAGATCAACGCCGTCTCCACGCTGACCATGATCGCCACCGTGGCCCTCGCGCTAGGCGCTGAAGTCATGATCCGCAGTGGAGGCGTGCATAGGCGCTAG
PROTEIN sequence
Length: 266
MTREQGIGTLALAVWTALVVLFLLLPLFVIVAFSFNDSDFPSFPMRGLTLKWYWRFLESDELLAALWNSTLVAFATMVLATTFGTLAAIGLARSGARTQKFMRPLLSTPMMTPRLVVGIALLNMFNLLSMQLSLLTVIVGHTVVAVPYVILVVSARLVGLDPRIEEAAADLGATRTRVLIDILLPLLRPAVLGSALIAFTLSFDEVVVTFFTTGTENTLPTTIWAMLRYGITPEINAVSTLTMIATVALALGAEVMIRSGGVHRR*