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SCNpilot_expt_1000_bf_scaffold_7532_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(3391..4626)

Top 3 Functional Annotations

Value Algorithm Source
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 403.0
  • Bit_score: 650
  • Evalue 3.00e-184
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795, ECO:0000313|EMBL:CCB67298.1};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 403.0
  • Bit_score: 650
  • Evalue 1.40e-183
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J898_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 403.0
  • Bit_score: 650
  • Evalue 9.60e-184

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGCTGACAAGTCCCGCTGAGCGTCGCCAGACCCATGCCGTGAATGTCGGTGGTGTGATCGTCGGCGGCGGCGCGCCGATCGTCGTTCAGTCGATGACCAACACCGACACGGCCGATGCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGAGCCGGCTCCGAGATCGTCCGCATCACCGTCGACCGCGATGAATCCGCGAAGGCCGTACCGCTGATCCGCGAGAAGCTCGCGAAGATGCGTGTCAGCGTGCCGATCGTCGGCGACTTCCACTACAACGGCCACGCGCTGCTCGCCGAGAACCCGGCGTGCGCGGAGTCCCTCGACAAGTACCGCATCAATCCCGGCAATGTCGGCTTCAAGGACAAGAAGGATCGCCAGTTCTCGGCAATCATCGATCTCGCGCTCAAGCACAACAAGCCCGTTCGGATCGGCGTGAACTGGGGTTCGCTCGACCAGGAGCTGCTCACGCACCTCATGGATCAGAATGCCAAGAGCGCCACGCCCAAGCCCGCACGCTCGGTCATGCACGAGGCGATCGTGCAATCGGCGGTGCTCTCGGCGGAGCGCGCTGAGGAGCTGGGCCTCGGCGGTGACCGCATCATCATTTCGGCCAAGGTCTCGGCCGTGCAGGATCTCATCGCGGTCTATTCGATGCTTGCGGAGCGCTGCCGCTACGCGCTGCACCTCGGGCTCACCGAGGCGGGCATGGGCTCGAAGGGCATTGTCGCGTCCTCGGCAGCCATGGGCATCGTTCTGCAGGCAGGCATTGGCGACACGATCCGCTACTCGCTGACGCCCGAGCCCGGCGGCGACCGCACGCTCGAGGTCCAGGCGGCGCAGGAGCTCCTACAGACCATGGGCCTGAGGACATTCATGCCGATCGTGGCGGCCTGCCCCGGCTGCGGGCGCACGACGTCGACGGTCTTCCAGGAGCTCGCCCGCGACGTGCAGACCATGATCCGTGAGCGTATGCCCGAGTGGCGCGCGCGCTATCCCGGCGTCGAGGGGCTGAACCTTGCCGTCATGGGCTGCATCGTGAACGGCCCCGGCGAATCGAAGCACGCCGACATCGGCATTTCGCTGCCCGGCACGGGCGAGCAGCCGGCGGCCCCCGTCTTCATCGACGGGCGCAAGGCCATGACGCTCCGCGGGCCGAATATTGCCAACGAGTTCAAGACGATCGTCGAGGACTACATCGAGAAGCGCTACGGGACCAAGGCCGCCCAGTAG
PROTEIN sequence
Length: 412
MLTSPAERRQTHAVNVGGVIVGGGAPIVVQSMTNTDTADAXXXXXXXXXXXRAGSEIVRITVDRDESAKAVPLIREKLAKMRVSVPIVGDFHYNGHALLAENPACAESLDKYRINPGNVGFKDKKDRQFSAIIDLALKHNKPVRIGVNWGSLDQELLTHLMDQNAKSATPKPARSVMHEAIVQSAVLSAERAEELGLGGDRIIISAKVSAVQDLIAVYSMLAERCRYALHLGLTEAGMGSKGIVASSAAMGIVLQAGIGDTIRYSLTPEPGGDRTLEVQAAQELLQTMGLRTFMPIVAACPGCGRTTSTVFQELARDVQTMIRERMPEWRARYPGVEGLNLAVMGCIVNGPGESKHADIGISLPGTGEQPAAPVFIDGRKAMTLRGPNIANEFKTIVEDYIEKRYGTKAAQ*