ggKbase home page

SCNpilot_expt_1000_bf_scaffold_15720_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(1866..2474)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003665D84 similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 202.0
  • Bit_score: 357
  • Evalue 1.10e-95
Dehydrogenase (Related to short-chain alcohol dehydrogenase) {ECO:0000313|EMBL:AHK05011.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 202.0
  • Bit_score: 357
  • Evalue 1.50e-95
short chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 202.0
  • Bit_score: 347
  • Evalue 2.10e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
GTGAAGGCGGTGGGCGCTGCGGCGTACGCCTTTCAGGCGGACCTGACCGGAGCTGCGGCCATGGAGAAGCTGTTCGTGGACGCAAAGGCGGCCATGGGCGGCATCGACATCGCGATCAATACCGTCGGCAAGGTGCTGAAAAAGCCGATTGCCGAGATTTCCGAGGCCGAGTTCGACGAGATGAGCGCCGTCAACTCCAAGTCGGCCTTCTTCTTCATCAAGGAAGCCGGCAAGAGCCTCAACGACAATGGAAAGCTGGTAACGCTGGTGACATCGCTGCTCGGCGCTTTCACGCCCTTCTACGCCGCTTATGCCGGTGGGAAGGCGCCCGTCGAGCACTACACACGCGCTGCGGCAAAGGAGTTCGGGGCTCGCGGCATCTCCGTCACGGCCATAGGCCCCGGGCCGATGGATACGCCCTTCTTCTATCCGGCCGAGGGCGCAGATGCGGTCGCCTATCACAAGACCGCTGCGGCGCTCTCGCCCTTTTCCAAGACCGGCCTGACCGACATCGAGGACATCATCCCGTTCATTCGCCTGCTGGTATCGGACGGCTGGTGGATGACCGGACAGACGATCCTGGTGAACGGCGGCTACACCACGAAGTGA
PROTEIN sequence
Length: 203
VKAVGAAAYAFQADLTGAAAMEKLFVDAKAAMGGIDIAINTVGKVLKKPIAEISEAEFDEMSAVNSKSAFFFIKEAGKSLNDNGKLVTLVTSLLGAFTPFYAAYAGGKAPVEHYTRAAAKEFGARGISVTAIGPGPMDTPFFYPAEGADAVAYHKTAAALSPFSKTGLTDIEDIIPFIRLLVSDGWWMTGQTILVNGGYTTK*