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SCNpilot_expt_1000_bf_scaffold_2708_curated_16

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(12568..15057)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036845A0 similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 813.0
  • Bit_score: 817
  • Evalue 1.60e-233
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 787.0
  • Bit_score: 832
  • Evalue 5.00e-238
organic solvent tolerance protein; K04744 LPS-assembly protein similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 787.0
  • Bit_score: 794
  • Evalue 2.60e-227

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 2490
GTGGAAGTAACGGGGCATGCGTTTCAGGCGGGAGGGGGAGCTCCGCGCAAGCCGTTTCGGCTGCGCGCGCGCCTGATCTTGTCTGCACTGTCCCTGATCGGGCTTTGCGCAACCGCGGTCGTGCTCCTCGCACCTTCGCCGGGCGCCGCGCGCGATGCCACCGATCCGCTCACGCGCGGCACCGGAATTCGCATCGACGATCCGGTTCGCAACCTGACTTCGCAGAAGCAGCAGTTCAAGAAGTCCAAAGGCGGCATCTTCGGCGGGACGCCCGCCAAGGTGGATCGCGCCGCGCCGCTCTATCTGCAGGGCGATGAGCTCATCTACGACACGGCCAACAATCGCGTCATCGCGATCGGCAACGTCGAGATCGTGTTCAACAACTACATTCTGACAGCCGATCGCGTCGTCTACGACCAGGGTGCGCAGACGCTCACCGCAGAGGGCAATGCGCAGCTCCAGGAGCCGAACGGCAACATCGTGCGCGCGGACAAGCTCACCGCGACGGATGACTTCCGCGAGGCTTTCGTCCAGGCGCTGAGCGTGACGGCACGTGACGACACCCGCATCACGGCGCGCCGCGCCGTACGTCGCGAAGGCAACGTCACCGAGTTCGAGCAGGGCCGCTTCACACCGTGCCGGACCGACGGCAGCAGCCCGCCGCTCTGGTGCATCAGCGCCGCCCGCGTCACACACGACCAGCAGGCCGGCACGATTACTTATCAGGATGCGGCGTTCGAGTTCTTCGGCGTCCCGGTTCTGTATATGCCGTGGTTCTCGCACGCCGATCCGTCGGTGAAGCGGCGCACGGGCTTCCTCTCGCCGGAGTACGGCCACACCAATACCCTCGGCACGACGCTTAGCGTTCCCTACTATTTCGCGCTCGCGCCGAACTACGACTTCACGTTCAACCCGATGTACACCTCGCGCCAGGGCGTGCTCTGGCAGGGTGAGTGGCGGCATAGGGTGAACTGGGGCGACATCCGCGGCACGTACAATATCAAGGTCGCAGGTATCGATCAGGACGTGAATACGCTCCCCGGTACGCCGGATCCGAAGCTCGACGGCTGGCGCGGCAGCGTGCAGACCCGCGGTCTGTTCTCTCTCTCGACGTGGTGGCGCTTCGGCTGGGATGTCACGGTCGAGAGCGACGACGCCTTCCGCCGCTTCTACAAGCTCGACAGCCTTCTGCAGACCGACCGCATCAATACGGTCTATTTGCAGGGTATGAGCGAGCGGAATTACTTCGCCGCGACGCTCTATCACTTCGGCAGTCTGCTGGTCGACGGCGGTGCCGATGCCGCGAGCCGCGTGCTGCCCGTGATCGACTACAACTACGTCGTCGATCGGCCGGTGGCGGGTGGCGAGCTGGCCTTCAATATGAATGCCGTGTCCCTCACGCGTTCGAACTCCGCCGCCACGGATATGCACCGTGCGTCCTTCGATGGCCGCTGGCGGAGCAAAGTCGTCGACGGACTCGGACAGGTGTGGACGCCGTACGTCTCGGCGCGGGGCGACGTGACCTCGTTCCAGAATGCCTGGGATCCGAACAACAACACGTGGGAAGACGGCAGCAGGACGCGCGCCTTGGGTACGGCCGCGCTCCCCTATGCCTATCCCTTCGTGAAGCATACCGGGGCTGGCAGCCACATCGTCGAGCCGATCGGCCAGGTCGTGACGCGTACAGCCGTCGCCTCTCAGCGCCGCTTGCCGGATGAAGACGCGAAGAGCCTTGTCTGGGATGACACGCTTCTCTTCGACGTCGACAAGTTCTCGGGATGGGATCGCGTCGAGACCGGCACGCGCGCCAACGTCGGTGTCCAATATACCTATCAGGCGACCGGTGGTGCGTACGCGCGCTTCATCCTCGGCCAGAGCTATCAGGTCGCGGGGGTGAACGCCTTCAACAATCCAGGCCAGCTTCCTGCGCCAGGCCAGCCCCCGAGCCCGTCCGACCCGTTCATCTTCAATTCGAAGAGTGGTCTCGAGACGACGCGTTCGGACTATGTCCTCGGCGCCTACCTTGCGCCGGCTGACGGCTTCCGTCTCGTGTCCCAGGCGCGTTTCGACGACAAGGATCTGTCGCTGCGCCGCAACGACACGTACACCTCATTCACGGCCGGTCCGCTCACTGCGCAGGTTCAGTACTCCTACATGCGCTTCAACCCGGATCAGCCCACCGACAAGCCTGAGCAGGAAGTCCAGTTCGGCGGCGCCCTGCGCCTGACCGATCGTTGGACGCTGCTCGGCGGCATTCGCTACGACATCGACACCCGCGAGCGGCTTCAGGACACGATCCAGCTTCGCTACGCCGACGATTGCTTCGTGCTGACGGCGTCGTACACGGAATCGTTCATTGCGAACCCGACGCTCGGCATCGAGCCGGACAAGGCCGTCATGCTGCGGCTCGAGTTCAAGCACCTCGGTCAGTTCGCGCTGAACTCGAACGTTGCCGGCGGTGTCGGCGCCGAGAACCAGCCCAGCAACTGA
PROTEIN sequence
Length: 830
VEVTGHAFQAGGGAPRKPFRLRARLILSALSLIGLCATAVVLLAPSPGAARDATDPLTRGTGIRIDDPVRNLTSQKQQFKKSKGGIFGGTPAKVDRAAPLYLQGDELIYDTANNRVIAIGNVEIVFNNYILTADRVVYDQGAQTLTAEGNAQLQEPNGNIVRADKLTATDDFREAFVQALSVTARDDTRITARRAVRREGNVTEFEQGRFTPCRTDGSSPPLWCISAARVTHDQQAGTITYQDAAFEFFGVPVLYMPWFSHADPSVKRRTGFLSPEYGHTNTLGTTLSVPYYFALAPNYDFTFNPMYTSRQGVLWQGEWRHRVNWGDIRGTYNIKVAGIDQDVNTLPGTPDPKLDGWRGSVQTRGLFSLSTWWRFGWDVTVESDDAFRRFYKLDSLLQTDRINTVYLQGMSERNYFAATLYHFGSLLVDGGADAASRVLPVIDYNYVVDRPVAGGELAFNMNAVSLTRSNSAATDMHRASFDGRWRSKVVDGLGQVWTPYVSARGDVTSFQNAWDPNNNTWEDGSRTRALGTAALPYAYPFVKHTGAGSHIVEPIGQVVTRTAVASQRRLPDEDAKSLVWDDTLLFDVDKFSGWDRVETGTRANVGVQYTYQATGGAYARFILGQSYQVAGVNAFNNPGQLPAPGQPPSPSDPFIFNSKSGLETTRSDYVLGAYLAPADGFRLVSQARFDDKDLSLRRNDTYTSFTAGPLTAQVQYSYMRFNPDQPTDKPEQEVQFGGALRLTDRWTLLGGIRYDIDTRERLQDTIQLRYADDCFVLTASYTESFIANPTLGIEPDKAVMLRLEFKHLGQFALNSNVAGGVGAENQPSN*