ggKbase home page

SCNpilot_expt_1000_bf_scaffold_26751_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 3442..5343

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, periplasmic substrate-binding protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RHE3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 614.0
  • Bit_score: 668
  • Evalue 6.90e-189
Uncharacterized protein {ECO:0000313|EMBL:CPR18947.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 618.0
  • Bit_score: 726
  • Evalue 3.90e-206
family 5 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 640.0
  • Bit_score: 664
  • Evalue 4.10e-188

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 1902
ATGGGGCGGATACTGGTGAACGAGGCCCGGAGGGACCGCGTCGGCGGCGCTGTCGTCGCTGCGCTCGCTGTGGCCGCGAGCATTGTGGCGCTGCCATCAGCCGGGCTCTGTGATCCGAACGCGCCTCGCGAGCACGCCATCTCGCTCCTCGGCTCGGTGCGCTACGGGCCGGACTTCAAGCATTTCGACTGGGTCGATCCCAATGCGCCGAAGGGCGGGCGCGTGCGGATGCGCGCCACCGGCACGTATGATTCGCTCAATCCGTACGCCCAGAAGGGCCTCGCGGCCGTCTGGTCCAATGTGATCCACGACTCGCTGATGGCAGAGAGCCTCGATGAGCCGGCGACCGAGTACGGCCTCATTGCGGAATGGGTCGCCCATGCCCCCGACTTCAGCTCGGCGACCTTCGGCATCAGACCCGAGGCGCGCTTCCATGATGGCCGCCCGATCACGCCCGATGACGTCGTCTTTTCCCTCGAGGCGCTCAAGAAATCGAGCCCGCGCTATCAGATCTACTTCAAGGATGTGACGCGCGCCGTGGTCTCTGGCGAGCGGATGGTGACATTCGAGTTCGCCGTGACAGGCAATCGCGAGCTGCCGGTGATCGTCGGCAGCCTGCCCGTCCTCGCGCGGCACTACTGGGAAGGAAAGGACGCGAACGGGGAGCCGCGTGATATCGCGCGCGGCACGACCGAGATCCCGCTCGGCTCGGGTCCTTACCGCATCAAGCAGGCCGACATCGGCCGATCCATCACCTACGAGCGCGTCGCCGACTGGTGGGCGCGGGATCTGCCCGTGTCGCGCGGCCAATGGAATTTCGACGAGGTGCGCTTCGAATACTTCCGCGATGCCGTTCCCGCCTTCGAGGCCTTCAAGGCCGGACAGCTCGATTTCTGGTCCGAATCGAGCGCCAAGTCCTGGGCCACGGCCTACGATTTCGACGCGCTGCGCCGCGGCCTCGTCAAGCGCGAGGAGTGGCAGAACGATCTCGTAACGCCCATGCAGGGCTTCGCCTTCAATATCCGCCGGCCGCAGTTCAAAGACCCGCGCGTGCGCCGCGCCTTCAATCTCGCTTTCGACTTCGAGTGGGCGAGCAAGAACATCCTCTTCGACCAGTACACGCGGGTCGGCAGCTACTTCGAAAATTCCGAGCTGAAAGCCAAAGGCCTGCCGACGGGGCGCGAGCTCGAATTGCTCGAAAGCGTACGTGAGCAGGTGCCGAAGGAGGTGTTCACCACACCTTATGCGAACCCCTTCAATCGCGGGCCCGAGGATGCGCGCCGACACATGGCGGAGGCGGCGAAACTGCTCGCGGCCGCCGGCTGGAAGCAGCAGAACGCCGAGCTGCGCAATGCCGCGGGCGAGGCCTTCACCGTCGAGTTCCTGATCGTATCGCCCGAGTTCGAGCGCATCATTCAGCCTTATGGGGTGGCGCTCGGCCGGCTCGGCATCAAGACGTCGATCCGCATCGTCGACAGCGCCCAGTATCGCCGGCGCCTCAATACGTTCGACTTCGACATGGTCGTCGCGAGCTTTCGCCAGTCGGTGACGCCGGGCAACGAGCAGCGCGACTACTGGGGTTCCGCGGCAGCCGACAGCGAAGGCAGTCGCAACTTGATCGGGATCAAGAATACCGCGGTCGATCAGCTTATCGAGAAGGTGATTTTTGCCACGGATCGCGCGGAGCTCGTGGCCGCATCACGCGCACTTGATCGGGTTCTGCTTTGGAACCATTACCTCGTTCCGCAGTGGTATGTTCCAAAGGAACGTGTGGCCATGTGGGACATGTTCGGCGGCCCGGCGAAGATGCCGACCCACGTTCAGGCCACCTCGCGCTTCCTGCAGGTGTGGTGGCACGATCAGGCTGCCGCTGCCCGGCTCTCGGACGCACGGCGACGATAG
PROTEIN sequence
Length: 634
MGRILVNEARRDRVGGAVVAALAVAASIVALPSAGLCDPNAPREHAISLLGSVRYGPDFKHFDWVDPNAPKGGRVRMRATGTYDSLNPYAQKGLAAVWSNVIHDSLMAESLDEPATEYGLIAEWVAHAPDFSSATFGIRPEARFHDGRPITPDDVVFSLEALKKSSPRYQIYFKDVTRAVVSGERMVTFEFAVTGNRELPVIVGSLPVLARHYWEGKDANGEPRDIARGTTEIPLGSGPYRIKQADIGRSITYERVADWWARDLPVSRGQWNFDEVRFEYFRDAVPAFEAFKAGQLDFWSESSAKSWATAYDFDALRRGLVKREEWQNDLVTPMQGFAFNIRRPQFKDPRVRRAFNLAFDFEWASKNILFDQYTRVGSYFENSELKAKGLPTGRELELLESVREQVPKEVFTTPYANPFNRGPEDARRHMAEAAKLLAAAGWKQQNAELRNAAGEAFTVEFLIVSPEFERIIQPYGVALGRLGIKTSIRIVDSAQYRRRLNTFDFDMVVASFRQSVTPGNEQRDYWGSAAADSEGSRNLIGIKNTAVDQLIEKVIFATDRAELVAASRALDRVLLWNHYLVPQWYVPKERVAMWDMFGGPAKMPTHVQATSRFLQVWWHDQAAAARLSDARRR*