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SCNpilot_expt_1000_bf_scaffold_6477_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 1527..2894

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BCN8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 395.0
  • Bit_score: 433
  • Evalue 2.70e-118
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 395.0
  • Bit_score: 433
  • Evalue 8.40e-119
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AGK58296.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 395.0
  • Bit_score: 433
  • Evalue 3.80e-118

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
GTGTTGAAGCTGCTCAAGCGATTGCTGGCGGTTGCCATTGTGTGCGCAATCGGAGGTGGCGTCTTTTATGTGACTACCCTGCCGGCCGTTCAGGAAAAAATGAGCGGCGCACGTCGCATGGGGGGTGGGATCAGCGCGGTGCCGGTGCTCGCGGCGTCGGCTCGACTGGATAATGTTCCGGTTTATCTCCATGGCGTGGGCACCGCCAAGGCGCGCAATTCAGTCGTCGTGCGGCCGCAGGTCGATGGCCGCATCCTGAGCATCAATTTCAAGGAGGGCCAGGAGGTCAGGAAGGGCGACGTGCTGGCCAAGATAGACCCCGCGACGTATCAGGCCCAGCTCGACCAGGCGATCGCCAAGAAGGCTCTCGATGAGGTCCAGCTCGAGAATGCCAAGCGCGACCTCGAGCGCTATTCCCAGCTCGGGGGCAACGTCGTGGCGCAAAAGACCATCGATACGCAAAACGCGCTGGTTGCTCAGTTCACCGCTCAGCTCAAGCAGGACGATGCGGCGATCGCCAACGCCCGCGCCTACCTGGACTACACCACCATCATCTCTCCCATCGACGGGCGCACCGGCATTCGCATGGTCGACCAGGGCAACCTCGTGCGCGCGGCCGATGCCGGTATCGTCATGATCACGGAGGTGCGGCCGATCTCGGTGCTGTTCACCCTGCCGCAGCAGCAGCTCGCTCAGGTCAACAAGGCGCTCGCCAGCAGGGTCCTCAGCGTGGATGCCCTCGATTCCAACAACCAGGTCGTGCTCGACCACGGCACACTGCAGGTGATCGACAACCAGGTCGACTCGGCCACCGGCACCATCCGCATGAAGGCAGAGTTTCCCAACGCGAACCTGCAGCTCTGGCCCGGCCAGTTCGTCAACGTGCGCATCCTGATCGACACGCTCGAGCGGGTCGTGGTCGTTCCTACTCCGGCAGTTCAGCGTGGCCCCAACGGCACGTTCGTCTATGTCGTGGAAGCCGATGAGAAGGTGGCGCTCAAGCCTGTGGCGCTGACCATGCAGAACGAGAGCGAAGCGGTGATTGCCACGGGTGTTGCCGCCGGCGACCGCATCGTGACGACCGGGTTTGCCCGCCTCAAGGACGGCGCACGCGTCGACGTCAGCGCGCCCGAGACGCCGGGTAGCCCCGCGCCGGTCAGCGCTAAGCCCGAGACCAAGACCGATCCGCGCAACGTCGTCGCGACCGCCTGTGCCGCTGATGTGCAGAAGCTCTGTCCTGGCGTCGAGCGGCAAGGCATTCGCGGCTGCTTGCGGGCCAATGCTGGGCAGCTCTCAGATACGTGCAAGGCCGCCGCGCTCGCGGCCGGCAGGAGCCAACGCAAGGCGGATAACACGGTCCTTCAATGA
PROTEIN sequence
Length: 456
VLKLLKRLLAVAIVCAIGGGVFYVTTLPAVQEKMSGARRMGGGISAVPVLAASARLDNVPVYLHGVGTAKARNSVVVRPQVDGRILSINFKEGQEVRKGDVLAKIDPATYQAQLDQAIAKKALDEVQLENAKRDLERYSQLGGNVVAQKTIDTQNALVAQFTAQLKQDDAAIANARAYLDYTTIISPIDGRTGIRMVDQGNLVRAADAGIVMITEVRPISVLFTLPQQQLAQVNKALASRVLSVDALDSNNQVVLDHGTLQVIDNQVDSATGTIRMKAEFPNANLQLWPGQFVNVRILIDTLERVVVVPTPAVQRGPNGTFVYVVEADEKVALKPVALTMQNESEAVIATGVAAGDRIVTTGFARLKDGARVDVSAPETPGSPAPVSAKPETKTDPRNVVATACAADVQKLCPGVERQGIRGCLRANAGQLSDTCKAAALAAGRSQRKADNTVLQ*