ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6477_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 7069..8787

Top 3 Functional Annotations

Value Algorithm Source
RND efflux transporter, HME family, translocase subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J819_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 563.0
  • Bit_score: 702
  • Evalue 3.90e-199
HME family RND efflux transporter translocase subunit; K07789 RND superfamily, multidrug transport protein MdtC similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 563.0
  • Bit_score: 702
  • Evalue 1.20e-199
Acriflavin resistance protein {ECO:0000313|EMBL:ADJ22750.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 562.0
  • Bit_score: 702
  • Evalue 5.40e-199

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
ATGGTGGTGGTCTACGTCTTTCTGCGCCGGCCGACGCCGACCATCGCTGCAGGCGTCACCGTGCCGCTGTCGCTGGCCGGCACCTGCGCCGCCATGTGGCTCGCCGGCTTCTCGATCAACAACCTGACGCTGATGGCACTCGCTGTCTCGGTTGGTTTCGTCGTCGACGATGCCATCGTCATGATCGAGAACGTGTTCCGCAATCTCGAGAAGGGCTGGTCGCCGATGCGTGCGGCGCTGGAGGGCGCCCGGCAGATCGGCTTTACGGTCGTCTCCATCAGCATCTCGCTCATTGCCGCCTTCATCCCGTTGCTGTTCATGAACGACGTCATGGGGCGTCTGCTGCGCGAGTTCTCGGTCACGCTGGTATTTGCCATTGCCGTGTCCCTCGTCGTCTCCCTGTCCGTGACGCCGATGATCTGCGCGCATTTCGTGCGCTCGCCGCCGAGCCCCAACGCCACCTGGCTCGACCGTATCGTCGAAACGGTGTTCGGCTGGGCCCTGCGCATCTACACGGTCACGCTGACCATCGCCATCCGCCACAAGGTGGTGATGCTGGCCACCTTGATCGCCACGGTGGTGCTTACGGCGGATCTCTACATCAAGAGCCCGAAGGGCTACTTTCCGCGCGACGATACCGGCTTGATCTTCGCGGGGACGCGCGCTCACACCGATACGTCCTTCGATACGATGGCGAGGCTCCAGCAGCAGGCGCTCGACATCGTGCTGGCCGATCCCGCCGTCGCCAATGTCGGCTCCTCGGTCGGCGCGTCGGGCTTCAGCGCCTCGGCCAATCGCGGCCGCATGTTCATCAGTCTGAAGCCGCTCGCTGAGCGGAACAATCTGCCGACCGCCCGCGTCATCGACCGGCTGCGCCGCGAGCTTTCGCAGGTGAGGGGCCTCGGTGTCTTCCTGGCCGCCGCGCAGGACATCCGCACGGGCGCGCGGCAGGCCGATTCAGACTATCAGTTCACGCTGTGGAGCACCGATGCCGGCGACCTCTATACCTGGGCGCCGAGGGTCGCGGACCGGATAGCGGCAATCCCGGGACTGGCCGACGTCAACAGCGATCGCGAGCAAGGCGGTTTGCAGGCGAACCTCACCATCAACCGGCAGGCGGCGGCGCGTCTTGGTGTGCGCATTCAGGACATCAACAACGCGCTCAACAACGCCTTCGCTCAGCGCCAGGTGTCGGTGATCTATACCCAGCGTAATCAGTATCGCGTCATCCTGGAGGTGGATCCGCGCTATCAGCAGGATCCAGAGGACCTGCAGCACATCTTCGTCCCTGGCTATGACGACGCGCAGATACCGCTGACCAGCGTCGTCAACATAACGCGTACGCTCGCGCCCCTCGTGGTCAACCATCAAGGCCCCTTTCCCGCCGTCACCATCAGCTACGGCCTTACTGCGGACATGACGCTCGACGAGGCGCAGGCCGCCATCAAGCAGGCCATTGCCGAGCTGCACCTGCCGGACAGCATCCGCGCCGAGGCGGCCGGCGATGCCAAGGCCTTCGCGCAGCAGGGCAACATGCAGGTGCTGCTGATCATTGCCGCGCTGCTCGCGGTCTACATCGTGCTCGGCGTACTCTACGAGAGCCTCGCGCATCCGGTCACGATCATCTCGACGCTGCCATCGGCAGGCCTCGGCGCGCTGATTGCGCTGCGCTTCTATGGCATGGAGNNNNNNNNNNNNNNNNNNGCATCATCCTGCTGA
PROTEIN sequence
Length: 573
MVVVYVFLRRPTPTIAAGVTVPLSLAGTCAAMWLAGFSINNLTLMALAVSVGFVVDDAIVMIENVFRNLEKGWSPMRAALEGARQIGFTVVSISISLIAAFIPLLFMNDVMGRLLREFSVTLVFAIAVSLVVSLSVTPMICAHFVRSPPSPNATWLDRIVETVFGWALRIYTVTLTIAIRHKVVMLATLIATVVLTADLYIKSPKGYFPRDDTGLIFAGTRAHTDTSFDTMARLQQQALDIVLADPAVANVGSSVGASGFSASANRGRMFISLKPLAERNNLPTARVIDRLRRELSQVRGLGVFLAAAQDIRTGARQADSDYQFTLWSTDAGDLYTWAPRVADRIAAIPGLADVNSDREQGGLQANLTINRQAAARLGVRIQDINNALNNAFAQRQVSVIYTQRNQYRVILEVDPRYQQDPEDLQHIFVPGYDDAQIPLTSVVNITRTLAPLVVNHQGPFPAVTISYGLTADMTLDEAQAAIKQAIAELHLPDSIRAEAAGDAKAFAQQGNMQVLLIIAALLAVYIVLGVLYESLAHPVTIISTLPSAGLGALIALRFYGMEXXXXXXASSC*