ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6477_curated_13

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(13463..14044)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid ABC transporter substrate binding protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XRQ7_DESMR similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 174.0
  • Bit_score: 157
  • Evalue 1.60e-35
amino acid ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 174.0
  • Bit_score: 157
  • Evalue 4.90e-36
Amino acid ABC transporter substrate binding protein {ECO:0000313|EMBL:BAH77973.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 174.0
  • Bit_score: 157
  • Evalue 2.20e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfovibrio magneticus → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
GTGCAGCTCCTTCAGCAGGGGCGCATCGACATCATCGTCGCCACGGTGAGCCACTATCGCAACCGCGATCGCGTCGTCGATTTCACACTGCCCTATCTCTACACGCCGCAAACTCTGCTCGTGAAGAAGGCGAGCGGCATCAAAAGCATGGCGGATATGGCCGGCAAACGCTTCGGTCTCGATGCCGGTTCGGGCGCGGTGAAGAATGTGCCGCGCGCCCAGCCCAAGGCGATCGTCCAGACCTTCCAGAACTGGCCTGAGGCCTTCTTCGCGCTGGAGCGCGGCACCGTCGATGCCGTGGCCACCGACAACCTTCTTCTCGCTGGTCTGCGCGCGGCCTCTCCCGATCCGAGCGCCTACGAGGTCGTCGGCAAGGAAGGTTTCTACGGCGGCGCCTACTATGCAGCCGTCGTGCGGGAGAACGACTCGAAGTCGCGCGACGCGATCAACTTCCTTCTGCAGGACCAGTGGAAGGACGGCACCTGGATGGCGATCTTCGACAAATGGCTCGGCAAAGACTCCGCTCTGAAGATGACGCTCGCCGACTTCAACGACTTCAGCATTCCGATTTGGGACGAATGA
PROTEIN sequence
Length: 194
VQLLQQGRIDIIVATVSHYRNRDRVVDFTLPYLYTPQTLLVKKASGIKSMADMAGKRFGLDAGSGAVKNVPRAQPKAIVQTFQNWPEAFFALERGTVDAVATDNLLLAGLRAASPDPSAYEVVGKEGFYGGAYYAAVVRENDSKSRDAINFLLQDQWKDGTWMAIFDKWLGKDSALKMTLADFNDFSIPIWDE*