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SCNpilot_expt_1000_bf_scaffold_7934_curated_8

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 4001..4942

Top 3 Functional Annotations

Value Algorithm Source
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 305.0
  • Bit_score: 396
  • Evalue 3.50e-107
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 305.0
  • Bit_score: 390
  • Evalue 4.30e-106
D-alanine--D-alanine ligase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I237_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 305.0
  • Bit_score: 390
  • Evalue 1.40e-105

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Taxonomy

Rhodomicrobium udaipurense → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGACGACCGACACCACCGGTCAGGGCAAGCCGCATGTCGCCGTGCTCATGGGTGGCTGGTCTGCCGAGCGCGAGGTGAGCCTCTCCTCGGGCCGCGAGTGCGCCAACGCGCTCGAAGGCGAAGGATTTCGCGTGACGCGCATCGACGTCGGTCATGATCTCGCGGCGCAGCTTGCCGAGATCAGGCCGGACGTCTGCTTCAATGCGCTGCATGGGCGCTGGGGCGAGGATGGCTGCGTGCAGGGTCTGCTCGAGGTGATGGAGATCCCCTATACGCACTCGGGTGTGCTCGCGTCCGCCATCGCCATGGACAAGGAGCGCACGAAGAAGATCGTGAGCGCCTTGGGCGTGCCCGTCGCACACGGTGTGCTCGTGACGCCGGATGCTGCGATCGCCGATCACGCGCTGCCGCCGCCGTACGTGGCGAAGCCCGTCGCGGAAGGGTCGAGCGTCGGCGTCGTTATCGTGAAGCTCGGCGCCAACCGGCCGCCCGAGGTCATCCGCAAGGTGCCCGTGAGCCGTGACGGCCAGATCATGGTCGAGAAATTCGTTGCCGGGCGTGAGCTCACGTGCGCCGTCATCGGCGACAAGGCGACCGACATCATCGATATCGTCGCCGCGGATCATCTCGAGTTCTACGATTACGAGGCCAAGTACGCGCCCGGCGGCTCAAAGCACATTCTGCCGGCCCGCATTCCCGACAATATCCGCCGCGCCGTGCAGGTGCATACGCTCGCTGCGCACCGGGCTCTCGGCTGCCGCGGCGTCTCGCGCTCGGACTTCCGCTGGGATGAAGCCTCGGGCGAGCTGGTGTTCCTGGAGATCAACACGCAGCCCGGTATGACGCCGACATCGCTGGTGCCGGAGCTCGGCCAGCACATGGGCCTGTCGTTCGGCCAGCTCGTTGCCTGGCTCGTCGAGGACGCCTCGATCGCACGCTGA
PROTEIN sequence
Length: 314
MTTDTTGQGKPHVAVLMGGWSAEREVSLSSGRECANALEGEGFRVTRIDVGHDLAAQLAEIRPDVCFNALHGRWGEDGCVQGLLEVMEIPYTHSGVLASAIAMDKERTKKIVSALGVPVAHGVLVTPDAAIADHALPPPYVAKPVAEGSSVGVVIVKLGANRPPEVIRKVPVSRDGQIMVEKFVAGRELTCAVIGDKATDIIDIVAADHLEFYDYEAKYAPGGSKHILPARIPDNIRRAVQVHTLAAHRALGCRGVSRSDFRWDEASGELVFLEINTQPGMTPTSLVPELGQHMGLSFGQLVAWLVEDASIAR*