ggKbase home page

SCNpilot_expt_1000_bf_scaffold_12628_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 2538..2828

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XEQ6_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 78.0
  • Bit_score: 87
  • Evalue 5.90e-15
XRE family transcriptional regulator {ECO:0000313|EMBL:KGM47649.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 81.0
  • Bit_score: 89
  • Evalue 3.70e-15
addiction module antidote protein, HigA family similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 77.0
  • Bit_score: 82
  • Evalue 5.90e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudooceanicola atlanticus → Pseudooceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGATCGTCCTCGATGGGCCATCACATCCGGGGCGCGTGCTCAAGGACCACTACCTTGACCCCCTCAACATGAGCGCCGGCGCCCTGGCGACCCGGACCGAGCTGTCGGTCGCCTTGCTCGTGCACCTCGTGAAGGGCGAGACGGGTATGACTGCCGAGATTGCAGTCCGCCTCGCGCGCTTCTTCAGCACTGCCCCCGAGTACTGGATGAACCTCCAGCGCAACTACGACCTGCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGCGTAG
PROTEIN sequence
Length: 97
MIVLDGPSHPGRVLKDHYLDPLNMSAGALATRTELSVALLVHLVKGETGMTAEIAVRLARFFSTAPEYWMNLQRNYDLHXXXXXXXXXXXXXXXGA*