ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6813_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 2433..3290

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter {ECO:0000313|EMBL:AHB47502.1}; EC=1.2.4.2 {ECO:0000313|EMBL:AHB47502.1};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 290.0
  • Bit_score: 403
  • Evalue 2.60e-109
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 284.0
  • Bit_score: 399
  • Evalue 1.10e-108
MFS transporter n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003658A9E similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 290.0
  • Bit_score: 404
  • Evalue 8.30e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
GTGAACGCCGCCTATATCGAGGAAATGCAGGCTCAGTACGAGCGCAATCCGGGCTCGGTCAGCGATCAGTGGCGGTTGTTTTTCCAGAGCCTCCAGGAAGAGCAGGCGCGCCAGGGCGGCGAGGGCAATGGCGGGCCGTCCTGGGGCCGGACGCTCGATGAGCTGCAGGCGACGACCTCAGGAGCTTCGGGCGAGCTGGTCGCCGCCCTGACGGCAGACTATGGCGCCGCCGAGCGGGACGTGCGCGAGAAGATCGGCCAGCGGGCGCAATCGTTCGGCTACGAGCTCTCGCCGGCCGCCTCCTACCGCGCCACGCAGGACAGCCTCCGCGCGCTCATGCTCATCCGCGCCTATCGCGTCATGGGCCATCTCGCCGCCGACCTCGATCCTCTCGGCATTTCAGAGCGCAAGATCCACAAGGAGCTGCGCCCCGAGACCTACGGCTTCACCGATGCCGATCTCGATCGCCCGATCTTCATCGACAAGGTGCTCGGCCTCGAAACGGCGACCATGCGCCAGATCCTGCGCATCCTGCGGCGCACCTACTGCCGGCAGATCGGCGTCGAGTTCATGCACATCACGAGCCCCGTGCAAAAGGCGTGGCTCCAGGAGCGCATCGAGGGGCCGGACAAGGACATTACCTTCACCAAGGAAGGCAAGCGCGCGATCCTCAACAAGCTGATCGAGTCCGAGTCCTTCGAGACCTTCGCCGACGTCAAATACACCGGCACGAAGCGCTTCGGCCTCAATGGCGGCGAAGCGATGATCCCGGCGCTGGAGCAGATCATCAAGCGTGGTGGTCAGCTCGGCGTGAAGGAGATCGTCTTCGGCATGGCNNNNNNNNNGCGAGCGTCATGA
PROTEIN sequence
Length: 286
VNAAYIEEMQAQYERNPGSVSDQWRLFFQSLQEEQARQGGEGNGGPSWGRTLDELQATTSGASGELVAALTADYGAAERDVREKIGQRAQSFGYELSPAASYRATQDSLRALMLIRAYRVMGHLAADLDPLGISERKIHKELRPETYGFTDADLDRPIFIDKVLGLETATMRQILRILRRTYCRQIGVEFMHITSPVQKAWLQERIEGPDKDITFTKEGKRAILNKLIESESFETFADVKYTGTKRFGLNGGEAMIPALEQIIKRGGQLGVKEIVFGMXXXXRAS*