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SCNpilot_expt_1000_bf_scaffold_14371_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(1044..1709)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JV49_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 200.0
  • Bit_score: 318
  • Evalue 4.70e-84
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 200.0
  • Bit_score: 318
  • Evalue 1.50e-84
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADJ22865.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 200.0
  • Bit_score: 318
  • Evalue 6.60e-84

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGGCGCCGGAGGGCCAAGCGGCAGATGTGGCAGTTACATTAACAGTGAAGTGGGGTTCAGAAATGGGGGATTCCTCGAAAGGGCCGCCGAACGTGCTTGACGGACTTGGCAATGAGCTGGCTCCGGGCTTGGGCGAGGCGGTCGATGGCGTCGAGGTCGTCGAGATTGCAGGCGCAATCAAATGGTTCGACGCCTCTAAGGGGTACGGGTTCATCGTTCCCGACAACGGCATGACGGACGTGCTTCTCCACGTCACGTGCCTCCGCGCCGGCGGCTTCCAGACCGCCTACGAGGGTGCCCGCGTGCACTGCCAGGCTCTCAAGCGGCCCAAAGGCATGCAGGCCTTCCGCATCATCAGCATGGACGAGAGCACGGCCATCCACCCCTCCCAGCTTCCGCAGCGCACACACGTCGTTGTGCAGCCCGAGAGCGGGTGGGAGCGCGCCGTCGTGAAGTGGTTCAACCGTGTACGCGGTTTCGGCTTCCTGACCCGCGGCGAGGGGACGCCCGACATCTTCGTGCACATGGAGACGCTGCGCCGCTTCGGCTTCACGGAGCTCAGGCCCGGACAGATGGTTCAGGTGCGCTGGGGAATGGGCTATAAGGGCTGCATGGCAGCCGACCTGCGCCCGGATGGGCCATCGGGACTGCCGCCCTCGCATTGA
PROTEIN sequence
Length: 222
MAPEGQAADVAVTLTVKWGSEMGDSSKGPPNVLDGLGNELAPGLGEAVDGVEVVEIAGAIKWFDASKGYGFIVPDNGMTDVLLHVTCLRAGGFQTAYEGARVHCQALKRPKGMQAFRIISMDESTAIHPSQLPQRTHVVVQPESGWERAVVKWFNRVRGFGFLTRGEGTPDIFVHMETLRRFGFTELRPGQMVQVRWGMGYKGCMAADLRPDGPSGLPPSH*