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SCNpilot_expt_1000_bf_scaffold_14371_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 3961..4209

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudogymnoascus destructans (strain ATCC MYA-4855 / 20631-21) RepID=L8FQK7_PSED2 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 82.0
  • Bit_score: 148
  • Evalue 3.10e-33
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 80.0
  • Bit_score: 156
  • Evalue 1.20e-35
RNA chaperone Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 82.0
  • Bit_score: 145
  • Evalue 8.30e-33

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 249
ATGGCTGCCGAGCGCGTGCAAAGCTTACAAGATACTTTCCTCAATTATGTTCGCAAAAATAAGACGCCACTCACCATCTTCCTGGTCAATGGCGTGAAGTTGCAGGGTATCGTGACCTGGTTCGACAATTTCTGCGTCTTGCTGCGGCGTGACGGGCACTCGCAGCTCGTCTACAAGCATGCGATCTCTACGATCATGCCCGGCCAGCCGGTCCATCTGATGGATACCGACCAGGCCGAAGGGCAATAG
PROTEIN sequence
Length: 83
MAAERVQSLQDTFLNYVRKNKTPLTIFLVNGVKLQGIVTWFDNFCVLLRRDGHSQLVYKHAISTIMPGQPVHLMDTDQAEGQ*