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SCNpilot_expt_1000_bf_scaffold_9797_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(893..1204)

Top 3 Functional Annotations

Value Algorithm Source
parC; DNA topoisomerase IV subunit A (EC:5.99.1.3); K02621 topoisomerase IV subunit A [EC:5.99.1.-] similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 101.0
  • Bit_score: 155
  • Evalue 1.00e-35
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936, ECO:0000313|EMBL:CCB65727.1};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 101.0
  • Bit_score: 155
  • Evalue 4.50e-35
DNA topoisomerase 4 subunit A n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JIC4_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 101.0
  • Bit_score: 155
  • Evalue 3.20e-35

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
GTGCCGGTCCCGCCGAGCGCGAACATGTGCGCGACCATCGGCGAGAACCGCCGGATGCTCGTCTTCAGCCTTGAAGAAATCAACGAGATGACGCGGGGCAAGGGCATCATCCTGCAGCGTTTCAAGGACGGCGGGCTTTCGGATGTCCGGCCTTTCGAGAAGAAGGCTGGCCTGACGTGGCTCGACTCCGCGGGACGCACGTATACGCTCGAGAGCAGCGAATTGAAGGAGTGGGTAGGGCAGCGCGCCCAGGCGGGTCGCACGGCGCCGAAGGGTTTCCCGCGCTCCAACCGCTTTGGGCCAGCCTTCTAG
PROTEIN sequence
Length: 104
VPVPPSANMCATIGENRRMLVFSLEEINEMTRGKGIILQRFKDGGLSDVRPFEKKAGLTWLDSAGRTYTLESSELKEWVGQRAQAGRTAPKGFPRSNRFGPAF*