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SCNpilot_expt_1000_bf_scaffold_11063_curated_1

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(3..563)

Top 3 Functional Annotations

Value Algorithm Source
Preprotein translocase subunit Tim44 n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S9X0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 170.0
  • Bit_score: 172
  • Evalue 4.60e-40
Preprotein translocase subunit Tim44 {ECO:0000313|EMBL:AHB47423.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 170.0
  • Bit_score: 172
  • Evalue 6.40e-40
import inner membrane translocase subunit Tim44 similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 172.0
  • Bit_score: 166
  • Evalue 7.90e-39

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGGCGGTGGCCCCCGCAGGCGAGGCCTATCGATGGAAAGCGGCTGACGTTATGGACGGCAAGATCGATATCTTCACCATCATGTTTCTGGTGCTGGCGGTGGTGATCATCCTGAAGCTCAGGAGCGTGCTGGGACGGCGGACGGGCGACGACGAGGCTCGGATCGATCGCAACCGGGCATTGGAGCGCGCGAGAGCTGCCGGTAAGAGCACCACGGACGACAAGGTCGTCGCACTCCCGCGCCGCGATCGCCCCGAGCAGGGCGGCGAGGCAACGGCAGCAGCAAGCTCTGCAGCCGCGGCGGCCGAGGAACGCGTGCGCACCTTTGCGGGCGGCGACAGCAATCTCGAGGAGGGATTGCTCTCGATCGTGCGTGCCGACCGCAGCTTCGACCCCGATGGCTTCCTCAAGGGCGCCCGCCAAGCCTACGAGATGATCGTCACGGCCTTTGCCGAAGGCAACCGCAAGGCACTCCGCTCGCTGCTGAGCAAGGAGGTCTTCGACGGCTTTTCCGGCGCGATCAGCGACCGCGAGGCGCGCGGCGAGATCATCGACCAGAGT
PROTEIN sequence
Length: 187
MAVAPAGEAYRWKAADVMDGKIDIFTIMFLVLAVVIILKLRSVLGRRTGDDEARIDRNRALERARAAGKSTTDDKVVALPRRDRPEQGGEATAAASSAAAAAEERVRTFAGGDSNLEEGLLSIVRADRSFDPDGFLKGARQAYEMIVTAFAEGNRKALRSLLSKEVFDGFSGAISDREARGEIIDQS