ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9883_curated_10

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(6725..7000)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L35 n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036D0165 similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 66.0
  • Bit_score: 118
  • Evalue 2.90e-24
rpmI; 50S ribosomal protein L35 similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 66.0
  • Bit_score: 116
  • Evalue 6.00e-24
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 66.0
  • Bit_score: 116
  • Evalue 2.70e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGCTTTGCATCACGCCTGCATTTCGCGGGCTCGCGCGGAGAAATCTGCGTAAAATCAAGAATATGGAGAGCCAAATGCCCAAGATGAAGACCAAGAGCGGCGCCAAAAAGCGCTTCAAGATCACGGGTACGGGCAAGGTTGTTGCCGCGGCCCAGGGCAAGCGTCACGGCATGATCAAGCGGACGGCCAAGTTCATCCGCTCGGCCCGCGGCACCATGACCCTCAACGACAGCGACGCCGGCATCGTCAAGAAGTACATGCCATATCATCGCTGA
PROTEIN sequence
Length: 92
MLCITPAFRGLARRNLRKIKNMESQMPKMKTKSGAKKRFKITGTGKVVAAAQGKRHGMIKRTAKFIRSARGTMTLNDSDAGIVKKYMPYHR*