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SCNpilot_expt_1000_bf_scaffold_5511_curated_1

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(2..421)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037F07B7 similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 140.0
  • Bit_score: 242
  • Evalue 2.10e-61
Conjugative transfer protein TrbB {ECO:0000313|EMBL:AGC71255.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 139.0
  • Bit_score: 216
  • Evalue 2.90e-53
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11 similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 135.0
  • Bit_score: 181
  • Evalue 2.30e-43

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Taxonomy

uncultured bacterium A1Q1_fos_75 → Bacteria

Sequences

DNA sequence
Length: 420
ATGGCTGACCTTCTGTCGATGCACGCCAGCCAGGAAGCGCAAGGCCGCCGGCGGCAGATGCTGCGCACCGCCTTTGGCCCGGCCATTGCCGCCGCCTTGACCGATCCGACCGTGATCGAGGTGATGGTCAATCCGGACGGCCGTCTCTGGATCGATCGCGCCAGCGTCGGTCGTCAGGACAGCGGCGAACGCATGGGCAGTGCCGAGGTCGAGCGCATTATCCGCCTCGTCGCAGCACACGTGCATCGCGAAGTTCATGCCGGCGCGCCGATCGTCTCGGCCGAGCTCCCGGAGACCGGCGAGCGCTTCGAAGGCATCATGCCGCCCGTCGCCATGGCGCCGTGCTTTTCCGTGCGCAAGCCGGCGGACGTCATCTACCGGCTTGCCGACTACGTGACGGCGCGCATCATATCGCCCTTG
PROTEIN sequence
Length: 140
MADLLSMHASQEAQGRRRQMLRTAFGPAIAAALTDPTVIEVMVNPDGRLWIDRASVGRQDSGERMGSAEVERIIRLVAAHVHREVHAGAPIVSAELPETGERFEGIMPPVAMAPCFSVRKPADVIYRLADYVTARIISPL