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SCNpilot_expt_1000_bf_scaffold_5511_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(959..2944)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003718018 similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 657.0
  • Bit_score: 931
  • Evalue 4.50e-268
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48476.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 656.0
  • Bit_score: 811
  • Evalue 7.40e-232
traG; Conjugal transfer protein; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 606.0
  • Bit_score: 807
  • Evalue 2.40e-231

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1986
ATGCTCCCGCTTCGCTCCGCGATCATTCAAGGTCTCATCGCTACCGCGCTCATCACGACATCGCTCGTCGTTGCCACACAGTGGGCCGCTGCGATGCTCGGGCATCAACCGGCGCTCGGCGCAGTATGGTGCGAACTCTTCGGTCTCAAACTCTACGCGCCGTGGAAGCTCTTCGTCTGGTGGCTGGCCTTCGACAGCCAGGCACCCGACGTGTTTGCACGCGCCGGTGCCGTTGCCGCCTTCGGGGGGATTGCCGGCGGCACCGTCGCTGTTGGGGGAGCCGCCCGGCGGGCCAGCCGTAAGAACACGATAACAACGTACGGCTCGGCCCGCTGGGCGGACGGCAATGATGTGCGCGACGCCGGACTGCTCGGCGACAAGGGCCTCATCCTCGGCCTGTGGGATGGACAATACCTGCGCCATGACGGCCCCGAACATGTCATCGCCGTTGCTCCGACCCGCTCCGGCAAAGGCGTCGGCCTCGTGGTGCCGACGCTGCTGACCTGGGGGCATTCCGCCGTCATCCACGACATCAAGGGGGAGAACTGGACTCTAACCGCCGGCTGGCGCTCACGGTTTTCCCATTGCCTGCTATTCGATCCGACCAACCCATTGTCGGCCCGCTTCAATCCGCTGCTTGAGGTGCGCAAGGGCGCGATGGAGGTGCGTGATGTGCAGAACATCGCTGACATCCTGGTCGATCCGGAAGGCGCGCGCGAGCAACGCGACCACTGGGAGAAAACCGCTCACGCGCTGCTCGTCGGCACGATCCTGCACGTTCTCTATGCCGAGCGAGAGAAGACGCTGTCTCGCGTCGCAACGTTCCTCGCCGATCCCGCGCGTTCGATTGGGCGCACGCTCTCGATCATGCTGACCACCAACCACCTGGGCACGGATACGACTCCAGTCGTGCATCCCGTCGTCGCATCGGTCGCACGCGAGCTCCTGAACAAAACCGACAACGAGCGCTCCGGCGTCGTCTCCACGGCCATGAGCCTGCTCGGTCTCTATCGTGATCCCATCATCGCCGCGACGACGGCGGCCTCCGACTGGTCAATCGCCGACCTCATGCAGGCCGAGCGGCCCGTCTCGCTCTACCTCGTCGTGCCGCCATCGGACATCTCACGCACGCGGCCGCTCGTGCGCCTGATCCTGAACCAGATCGGCCGCCGTTTGACCGAGACGTTGACGGAAGGGACCGCGAACGAACGGCGGCTGCTGCTCATGCTCGACGAGTTTCCCGCGCTCGGTCGGCTCGATTTCTTCGAGTCGTCGCTCGCCTTCCTTGCCGGCTATGGCGTCCGCGCCTTCCTCGTCGCACAGTCGCTTCACCAGATAGACAAGGCGTACGGTTCCAACCACGCCATTCTCGACAACTGCCACGTGCGTATCGCCTTCGCGCCGAACGATGAGCGCACGGCACGCCGACTTTCAGACGCGCTTGGGACAGCGACGGAGCTCCGAGAGCAGAAGAATCTCTCCGGACGGCGTCTCGCCGCATGGCTATCGCACGTCACCGTGTCCGAGCAGGAGACCGCGCGGCCGCTGCTGACGCCGGGCGAGATCCTGCAATTCCCCACCACTGACGCTCTGGTGCTCGTTTCCGGCGTGACACCAATCCGTGCCCAGAAACTCCAATACTATGCTGACCGCAACTTCCTCGCACGACGGCTGGCTGCGCCAACGCTCGCTACGGGCGGCTACGCGGACACGCCCCCAATCCGTGCCCACGACTGGCCGAGCGAAGTGCGCACCACGCATCCCAAGCTCGACAAGTCCTGGTCCGAGATGGTGACGGGCGAGGAAGATCCGCCGCGCACCCGGCAGATCGCGCGCACCAAGACAAAGGCGAGCCAGGTTAACGACCTGCCCCTGTTTGCTGATCTCGCGACCGAGGAGAAAGCCGCGCCACAACCCGATGTCGGCCCGTCGCTCGGCGACGATGACGACACCATCGTGCAGTTTCCGGGAGGGGTGCGGGTCTAA
PROTEIN sequence
Length: 662
MLPLRSAIIQGLIATALITTSLVVATQWAAAMLGHQPALGAVWCELFGLKLYAPWKLFVWWLAFDSQAPDVFARAGAVAAFGGIAGGTVAVGGAARRASRKNTITTYGSARWADGNDVRDAGLLGDKGLILGLWDGQYLRHDGPEHVIAVAPTRSGKGVGLVVPTLLTWGHSAVIHDIKGENWTLTAGWRSRFSHCLLFDPTNPLSARFNPLLEVRKGAMEVRDVQNIADILVDPEGAREQRDHWEKTAHALLVGTILHVLYAEREKTLSRVATFLADPARSIGRTLSIMLTTNHLGTDTTPVVHPVVASVARELLNKTDNERSGVVSTAMSLLGLYRDPIIAATTAASDWSIADLMQAERPVSLYLVVPPSDISRTRPLVRLILNQIGRRLTETLTEGTANERRLLLMLDEFPALGRLDFFESSLAFLAGYGVRAFLVAQSLHQIDKAYGSNHAILDNCHVRIAFAPNDERTARRLSDALGTATELREQKNLSGRRLAAWLSHVTVSEQETARPLLTPGEILQFPTTDALVLVSGVTPIRAQKLQYYADRNFLARRLAAPTLATGGYADTPPIRAHDWPSEVRTTHPKLDKSWSEMVTGEEDPPRTRQIARTKTKASQVNDLPLFADLATEEKAAPQPDVGPSLGDDDDTIVQFPGGVRV*