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SCNpilot_expt_1000_bf_scaffold_12323_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 2864..3724

Top 3 Functional Annotations

Value Algorithm Source
Sulfate thiol esterase SoxB n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07M24_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 276.0
  • Bit_score: 324
  • Evalue 1.40e-85
2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase {ECO:0000313|EMBL:CEJ12776.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 276.0
  • Bit_score: 336
  • Evalue 5.10e-89
5'-nucleotidase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 276.0
  • Bit_score: 324
  • Evalue 4.50e-86

Lists

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Notes

the gap below contains part of soxB Rose Kantor (11/25/15)

Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 861
ATGCACTCCCGTCGCGAGTTTCTGCAGGTTGCTCTGGCGGCAGGCGCACTCACGGGCCTTGCCGGCACTTCCGCGCTCGGGCAGGCACTGCGCCGCGGTCTCAGCCAGGAGGACATTCTCCGCTTCGAGGCCAAGGGGCAGGTGACCATCCTGCACTTCTCGGACTGCCACGCGCAGATCCGCCCGGTCTATTTCCGCGAGCCCTCGGTCAATCTCGGCGTCGGCGAGGCGCGCGGGCTTCCGCCGCATCTCACGGACCGCGAGTTCCTCACCCACTTCGGTATCGCCCCGGGCTCGGCCCAGGCCTACATGCTCTCCTCGGCCGACTTCGAGGTGCTTGCAAAGGACTACGGTCGCGTCGGCGGCATGGATCGGCTGGCGACGCTCGTGAAGGCTGTCCGCGCCGAGCGGGGTGCCGAGCGCACGCTGCTCCTCGATGGTGGCGATACGCTGCACGGTTCCTACACGGCGCTGCAGACCAAGGGCGGCGACATGGTGCGCATTGCTGAGGCGCTCGGTGTCGATGCGATGACGGCCCACTGGGAATTCACGCTCGGCCATGAGCGCGTCAGTGCGCTTTTCGGCAACAAGGACGGGCGCGGCTCGGCGAAGATCGACTTCCTCGCCGGCAACGTCATGGACACCGAATTCGAGGAGCCGGTCTTCAGGCCCTGGCGCATCTACGAGAAGGGCGGCGTGCGCATCGGCGTCATCGGCCAGGCCTTTCCCTATACGCCGATTGCCAATCCGCGCTGGATGATCCCCGGGTGGTCCTTCGGTATCCGCGAGGAGGAAGTGCGCCGCAATGTGGCCGCCGTGCGCGCCNNNNNNNNNNNNNNTCAACTCGCACAATGGCTTTGA
PROTEIN sequence
Length: 287
MHSRREFLQVALAAGALTGLAGTSALGQALRRGLSQEDILRFEAKGQVTILHFSDCHAQIRPVYFREPSVNLGVGEARGLPPHLTDREFLTHFGIAPGSAQAYMLSSADFEVLAKDYGRVGGMDRLATLVKAVRAERGAERTLLLDGGDTLHGSYTALQTKGGDMVRIAEALGVDAMTAHWEFTLGHERVSALFGNKDGRGSAKIDFLAGNVMDTEFEEPVFRPWRIYEKGGVRIGVIGQAFPYTPIANPRWMIPGWSFGIREEEVRRNVAAVRAXXXXXQLAQWL*