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SCNpilot_expt_1000_bf_scaffold_11503_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(1818..3107)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 429.0
  • Bit_score: 564
  • Evalue 1.30e-157
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 424.0
  • Bit_score: 484
  • Evalue 3.90e-134
diaminopimelate decarboxylase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034D16F7 similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 424.0
  • Bit_score: 488
  • Evalue 5.10e-135

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGCATCACTTCACCTATCGCGACGGCCGGCTCCATGCCGAGGATGTCGATCTCACGACCCTTGCCGACGCGGTTGGCACGCCCTTCTACTGCTATTCGACCGCCACGCTCGAACGGCACTATTCCGTATTTTCACGGGCCGTAGGCGCTCCCAAGGCCCGCGTCTTCTTCGCCATGAAGGCGAACAGCAATCTCGCGGTGCTGAGCACGCTCGCCCGCCTCGGCGCCGGCGCCGATACCGTCTCCGAGGGCGAGATCCGCAAGGCGCTGGCGGCCGGCATTCCGGCAAGCTCGATCGTGTTTTCCGGCGTCGGCAAGAGCGAGAGCGAGCTCGCCTTCGCCGTGGATGCGGGCATCTATCAGATCAATATCGAGACCGAGGGCGAGTTGCACATGCTCTCCCGCATCGCCGCGGCCCGGAGGAAGCGCCAGAACGCCGTCTTCCGCATCAACCCGGACATCGGCGCCGGCGGCCACGCCAAGATCACGACCGGGTCTGAGGGTAACAAGTTCGGCATCAGCATCAGCGAGGCCGAGCGCCTTTACACGGTCGCGGCCAACCTGCCCGGCGTGCGCATTCTCGGCCTCGCCGTGCACATCGGCAGCCAGATCCGCGAGCTCGACGAGCTGCAGGCCGCCTTCGGCCGCTTGCGCGAGCTGGCCGAGCGCCTTGCTGCCCAGGGCCACCGCGTCGAGCGCATCGACCTCGGCGGCGGCCTCGGCATTCCCTATGAGATGGAGGAGGCAGTCGATCACGGCCCCGGCCTCATCGAGGCCTATGCCAGCATGGTGGCGAGCACGTTCGCCGGCCTCGATGCCGAGCTTGCCTATGAGCCGGGCCGCCTGATCGTCGGTAATGCCGGCATCCTCGTCACCCGCGTCATCACGCTCAATCCGCGCGCGAGAAAAACCATCCTCGTCGTCGACGCGGCCATGAACGACCTCATCCGGCCCGCCATGTACGACGCCTTCCACGACATCTGGCCCATCCGAGAGCCGGCCCTCGGAACGCCGAACCGGCTCTATGACGTGGTCGGCCCGATCTGCGAGAGTGGCGACACGTTCGCCACGGGCCGCACGCTGCCCGAGACCCAGCCGGGCGACCTCGTCGCCCTCATGACCGCCGGCGCCTACGGGGCCGTCATGTCCTCGACCTACAATTCCCGCCTGCTGGTCCCCGAGGTCATGGTCCATGGCGCCGACTGGGCCGTTGTCCGCCCGCGGCCGACCTACGAGGAGCTCATCCAGCTCGACCACCTGCCGGCCTGGCTGAACAGCACCTCCCGCTGA
PROTEIN sequence
Length: 430
MHHFTYRDGRLHAEDVDLTTLADAVGTPFYCYSTATLERHYSVFSRAVGAPKARVFFAMKANSNLAVLSTLARLGAGADTVSEGEIRKALAAGIPASSIVFSGVGKSESELAFAVDAGIYQINIETEGELHMLSRIAAARRKRQNAVFRINPDIGAGGHAKITTGSEGNKFGISISEAERLYTVAANLPGVRILGLAVHIGSQIRELDELQAAFGRLRELAERLAAQGHRVERIDLGGGLGIPYEMEEAVDHGPGLIEAYASMVASTFAGLDAELAYEPGRLIVGNAGILVTRVITLNPRARKTILVVDAAMNDLIRPAMYDAFHDIWPIREPALGTPNRLYDVVGPICESGDTFATGRTLPETQPGDLVALMTAGAYGAVMSSTYNSRLLVPEVMVHGADWAVVRPRPTYEELIQLDHLPAWLNSTSR*