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SCNpilot_expt_1000_bf_scaffold_7147_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(2660..3304)

Top 3 Functional Annotations

Value Algorithm Source
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 195.0
  • Bit_score: 307
  • Evalue 1.90e-80
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 205.0
  • Bit_score: 301
  • Evalue 1.80e-79
NADH dehydrogenase subunit C n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SDV0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 195.0
  • Bit_score: 307
  • Evalue 1.40e-80

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGCAGACGACCAGCGACAGCCTCGACGAGCTCAAGGAGCACATCACCGCCGGCCTTGGCGACAGGCTGCGCGAGACGCGCATCGCGTACGGCGAGCTCACGCTCCTCGTTCCGCGCGAGCAGATCGTGCCGGTTCTGACGTACCTGCGCGACAACGGGCGCTGCCAGTTCGAAGTGCTCATTGACATCTGCGGCGTCGATTATCCCGCGCGCGAGCGGCGTTTCGATGTCGTGTACCACCTGCTTTCGGTGCGCCAGAACCAGCGGATCCGCGTCACGCTCGAGACCGACGAGACGACGCCCGTCCCGAGCGTCGTCAACGTCTTTCCTGCCGCCAACTGGTATGAGCGCGAGGCCTATGACATGTACGGGATGCCCTTCTCGGGGCACCCGGACCTCCGCCGGCTTCTGACCGACTACGGCTTCGAAGGCTATCCCCTGCGCAAGGACTTTCCCCTCACGGGCTATGTCGAGGTGCGCTACGACGACGAGCTGAAGCGCGTCGTCTACGACCGCGTGCGGCTCACGCAGGAGTTCCGCAACTTCGACTTCGAGAGCCCTTGGGAAGGCGTCGACTATGTCCTCCCCGGGGACGAGAAGGCGGCAGCCCCGCCGCCCGCGCCGCCGCCTCCCGCGAAGAACTGA
PROTEIN sequence
Length: 215
MQTTSDSLDELKEHITAGLGDRLRETRIAYGELTLLVPREQIVPVLTYLRDNGRCQFEVLIDICGVDYPARERRFDVVYHLLSVRQNQRIRVTLETDETTPVPSVVNVFPAANWYEREAYDMYGMPFSGHPDLRRLLTDYGFEGYPLRKDFPLTGYVEVRYDDELKRVVYDRVRLTQEFRNFDFESPWEGVDYVLPGDEKAAAPPPAPPPPAKN*