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SCNpilot_expt_1000_bf_scaffold_3377_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(6585..6791)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=3 Tax=Hyphomicrobium RepID=D8JRF7_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 66.0
  • Bit_score: 118
  • Evalue 3.80e-24
Major cold shock protein {ECO:0000313|EMBL:CPR19486.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 68.0
  • Bit_score: 120
  • Evalue 1.10e-24
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 66.0
  • Bit_score: 118
  • Evalue 1.20e-24

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 207
ATGGCTACCGGCACCGTCAAATGGTTCAACTCTCAGAAGGGCTATGGTTTCATCCAGCCCGACGAGGGTGGGAACGACGTGTTCGTGCACATCTCAGCCGTCGAGCGTGCGGGTCTCAGCAATCTTCGCGAAGGCCAGAAGATTTCCTACGAGATCGAGCGCGGCCGCAACGGTAAGTCGTCTGCCGTCAACCTGCGAGTCGACTGA
PROTEIN sequence
Length: 69
MATGTVKWFNSQKGYGFIQPDEGGNDVFVHISAVERAGLSNLREGQKISYEIERGRNGKSSAVNLRVD*