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SCNpilot_expt_1000_bf_scaffold_2577_curated_10

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(8997..10232)

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD family protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2C0_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 392.0
  • Bit_score: 408
  • Evalue 8.30e-111
Multidrug resistance efflux pump {ECO:0000313|EMBL:CPR22042.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 375.0
  • Bit_score: 476
  • Evalue 4.60e-131
secretion protein HlyD; K03543 multidrug resistance protein A similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 392.0
  • Bit_score: 408
  • Evalue 2.60e-111

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 1236
ATGCTGGATAATCAAGAGTTTGAAGACGATCGTGAGCAAAAGGTCGAGGTCGCGGACAAGGCGGAGAGCCTGCCCGAGCCTGCGGAAAGCCTTGCCAAGCCGGCCGAACCGAGCAAACCCGCCGGGGCACCTGCTCCGGCGGGACGCCGCAAGTCACTGGTCCGTGGCGCAGCCGCGCTCGGACTGCTGCTGGCCCTCGGCGGCGGCGCATACTACGGCAACTACTGGTGGACGGCCGGCCGCTTCCTCGTGAGCACGGACGACGCCTATGTCGGGGCCAAGAGCGCGACGCTTTCGCCGAAGGTCTCGGGCTACATCTCGGACATCGCGGTGGCCGACAACGCCCAGGTCTCGGCCGGTGACGTCATCGCGCGCATCGACGACGGCGACTATCGCCTCGCGGTGCAGACCGCGCGGGACCAGATTGCCGTCCAACAGGCGACGGTGCAGCGCCTCGGCCAGCAGGTCACCGCCCAGGAGGCCATGGTCGATCAGGCCAAGGCGCAGCTTGCCTCCACGAAGGCCGGCCTCACCCGAGCCGACCTTGAGCTGAAGCGTCAGCAGGATCTGGCCGCGCGTCAGATCAACAGCAGGCAGCTCCTCGAGCAGGCACAGGCCTCGTACGATCAGGCTGTGGCTGCCGTGCAGGCGGCCGAAGCCACGCTCCACTCGGCGTCGGCCAATGTCGGCGTATTGAGCGCGCAGCAGGAAGAGGCACGCCGTACCCTCAAGCAGTACGAGACGTCGCTTGCCAAGGCCGAGCGTGATCTCTCCTTCACCGTGATCCGCGCGCCCTTCGACGGCGTCATCGGCAACCGCGCCATGCAGATCGGCGACTATGTTCAGCCGACGCAGCGGCTCGCGAGCCTCGTGCCGCTCGACGCCGTCTATGTCGACGCCAACTTCAAGGAAACGCAGCTCTCGCGCGTGCAGCCCGGCCAGCCGGTGAGCATCGCGGTCGATGCATTCCCTGAGCACAACATCGACGGCCGCGTGGCGAGCGTCGCCCCCGCATCGGGCTCGGTGTTCTCGCTGCTGCCGCCGGACAACGCGACCGGCAACTTCACCAAGATCGTGCAGCGGCTTCCCGTTCGCATCCACGTGCCTGCCTCCGTCGCCGAGAAGTCTCTGCTGCGGCCCGGCATGTCGGTCGTCGTGAGCGTGAACACGAAACCGGGCGCCCCTGTCACCGAGCAGAAGCTGACGAGCGCCCAGGTGCGCCCGACTACGAACTAA
PROTEIN sequence
Length: 412
MLDNQEFEDDREQKVEVADKAESLPEPAESLAKPAEPSKPAGAPAPAGRRKSLVRGAAALGLLLALGGGAYYGNYWWTAGRFLVSTDDAYVGAKSATLSPKVSGYISDIAVADNAQVSAGDVIARIDDGDYRLAVQTARDQIAVQQATVQRLGQQVTAQEAMVDQAKAQLASTKAGLTRADLELKRQQDLAARQINSRQLLEQAQASYDQAVAAVQAAEATLHSASANVGVLSAQQEEARRTLKQYETSLAKAERDLSFTVIRAPFDGVIGNRAMQIGDYVQPTQRLASLVPLDAVYVDANFKETQLSRVQPGQPVSIAVDAFPEHNIDGRVASVAPASGSVFSLLPPDNATGNFTKIVQRLPVRIHVPASVAEKSLLRPGMSVVVSVNTKPGAPVTEQKLTSAQVRPTTN*