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SCNpilot_expt_1000_bf_scaffold_2577_curated_22

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(19910..20521)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase LigD, polymerase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 167.0
  • Bit_score: 287
  • Evalue 3.30e-75
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000366A22A similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 207.0
  • Bit_score: 295
  • Evalue 5.10e-77
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:CCB65650.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 167.0
  • Bit_score: 287
  • Evalue 1.50e-74

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
GTGGCCCGCACGAAGCTCACCGAGTACCGCGCACGCCGCGATTTCACCAAGACTGACGAGCCGAGCGGCAGGAGCGCGATCAAGCCTGCCGAGTACCCGCGCTTCGTCATCCAGAAACATGATGCGACGCGCCTTCACTACGACCTGCGTCTCGAGGTCGACGGCGTGTTCAAGTCGTGGGCGGTGACGCGAGGCCCATCGCTCGACCCGAGCGACAAGCGTCTCGCCGTCGAGGTGGAGGATCACCCGCTCGACTACGGAGATTTCGAGGGCACCATCCCGGAGGGCGAGTACGGCGGCGGCACGGTCATGCTGTGGGACCGCGGCTTCTGGATGCCCGAAGGCAACGAGCCCGCAAACGAAATGCTGCGCGATGGCGAGCTGAAGTTCGTGGTGGCCGGCGAGAAGCTCAAGGGAAGCTGGGTGCTCGTGCGCATGTCGGGCGACCGCTACGGCGGCAAGCGCACGAACTGGCTGCTCATCAAGCATCGCGACAAGTGGCCCGCGCGAAATCGCAAGGCGNNNNNNNCAAGAAGGATCGCTCCGTCGCATCCGGCCGCACGATGGGGCAGATCGCGGCAGGCAAGGGCGAGAGCCCATCGGCCTTCATGA
PROTEIN sequence
Length: 204
VARTKLTEYRARRDFTKTDEPSGRSAIKPAEYPRFVIQKHDATRLHYDLRLEVDGVFKSWAVTRGPSLDPSDKRLAVEVEDHPLDYGDFEGTIPEGEYGGGTVMLWDRGFWMPEGNEPANEMLRDGELKFVVAGEKLKGSWVLVRMSGDRYGGKRTNWLLIKHRDKWPARNRKAXXXRRIAPSHPAARWGRSRQARARAHRPS*